DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and zgc:172053

DIOPT Version :9

Sequence 1:NP_001285727.1 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:265 Species:Drosophila melanogaster
Sequence 2:NP_001104712.1 Gene:zgc:172053 / 100002541 ZFINID:ZDB-GENE-080219-25 Length:151 Species:Danio rerio


Alignment Length:150 Identity:37/150 - (24%)
Similarity:67/150 - (44%) Gaps:18/150 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   123 LTSITTSLKNMS-AKINILHRFKRIGSR-YLHIEDIVQQNWTSALSACQKMGGNLASIINEADFN 185
            |.|:..||.|.. ......:.:.:.|.: |..|...|  .|.:|...||.:|.||||:.::|:.:
Zfish     9 LLSVMFSLGNAGIGTCQCPYGWSKFGVKCYRFISQSV--TWATAEKNCQSLGANLASVHSKAEND 71

  Fly   186 AIVSQLSKDNT-YMIGISDLAEKGVFISVSSGKRAPFLKWNPGEPLYEHVDQRCVSIHNGGMWVA 249
            .::|.:...:| ..||..|...:|.:: .:.|....:..|...||..::| :.|:.:    .|..
Zfish    72 FLLSLIPSSSTRCWIGGHDGENEGRWL-WTDGSVIDYNNWCATEPNNQNV-ENCMEM----QWTV 130

  Fly   250 -------SCTSDFKYICEAN 262
                   :|::...|:|.||
Zfish   131 NRCWNDQACSTSMGYMCAAN 150

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_001285727.1 Mer2 <12..134 CDD:286200 5/10 (50%)
CLECT 160..260 CDD:153057 25/107 (23%)
zgc:172053NP_001104712.1 CLECT 26..147 CDD:214480 29/128 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100086
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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