DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-28C and si:ch211-125e6.14

DIOPT Version :10

Sequence 1:NP_652636.2 Gene:lectin-28C / 53542 FlyBaseID:FBgn0040099 Length:253 Species:Drosophila melanogaster
Sequence 2:NP_001104711.1 Gene:si:ch211-125e6.14 / 100002523 ZFINID:ZDB-GENE-070912-38 Length:149 Species:Danio rerio


Alignment Length:125 Identity:31/125 - (24%)
Similarity:60/125 - (48%) Gaps:15/125 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 FKRIGSR-YLHIEDIVQQNWTSALSACQKMGGNLASIINEADFNAIVSQLSKDNTYMIGISDLAE 206
            :|..||| :....:.|  :|.:|...||.:|.|||||.::.:.:.::|.:.......:|..|..:
Zfish    28 WKNSGSRCFKFFSESV--DWITAERNCQGLGTNLASIQDKVENDFLLSLVPDSTRCWVGGHDGEQ 90

  Fly   207 KGVFISVSSGKRAPFLKWNPGEPLYEHVDQRCVSIHNGGMWVAS-------CTSDFKYIC 259
            :|.:: .:.|....:..|.||||...:..:.|:.|:    |.::       |::...|:|
Zfish    91 EGQWL-WTDGSVYNYTNWYPGEPNNNNGKENCLEIN----WTSNRCWNDQGCSTSMGYLC 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-28CNP_652636.2 SMC_N <20..>160 CDD:481474 5/17 (29%)
CLECT 160..260 CDD:153057 26/107 (24%)
si:ch211-125e6.14NP_001104711.1 CLECT 24..145 CDD:214480 30/123 (24%)

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