DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-30A and Clec1a

DIOPT Version :10

Sequence 1:NP_652635.2 Gene:lectin-30A / 53541 FlyBaseID:FBgn0040097 Length:223 Species:Drosophila melanogaster
Sequence 2:NP_001102723.1 Gene:Clec1a / 500337 RGDID:1566110 Length:269 Species:Rattus norvegicus


Alignment Length:214 Identity:42/214 - (19%)
Similarity:80/214 - (37%) Gaps:61/214 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 WFTFIALKESEMQQKIVRIERSIEERLMAMQSKLAYALNELQTIMGNQSVETLEKLRI------- 96
            :|.|..|  |..||..:..:   :|||    ..::..|..||| ...:..|||:::.:       
  Rat    71 FFQFYQL--SNTQQDSITEK---DERL----GNMSRQLQSLQT-QNRKLTETLQQVAVKLCRELY 125

  Fly    97 ----SHRINPA--LFQRMGTRRFYIEKENKQNWFGASNTCRQLGGHIATIRDEQE--------FN 147
                .||.:|.  .::..|.:.:...||:| .|......|......:..|..::|        ::
  Rat   126 NKSGGHRCSPCPEKWKWHGNKCYQFYKESK-TWQSCEYFCLADNATMLKISTQEELDFAMPQSYS 189

  Fly   148 EIF-------SRAPAGVFWIDMNA------MFKNGLFASSLTGRSPPFFKWKKEERGNKFDCVNV 199
            |.|       ||..:|..|:..:.      :|:..:..::|..|                ||:.:
  Rat   190 EFFYSYWTGLSRNGSGKAWLWTDGTPYSFELFEIIIDPTNLRSR----------------DCMTI 238

  Fly   200 YNKEMYNENCFNTHLFICQ 218
            :|.:.|:::|.......|:
  Rat   239 FNGKAYSKDCKELRRCACE 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-30ANP_652635.2 CLECT 118..218 CDD:153057 20/120 (17%)
Clec1aNP_001102723.1 CLECT_NK_receptors_like 136..258 CDD:153063 23/139 (17%)

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