DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and Cd209b

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_081248.4 Gene:Cd209b / 69165 MGIID:1916415 Length:325 Species:Mus musculus


Alignment Length:132 Identity:32/132 - (24%)
Similarity:58/132 - (43%) Gaps:15/132 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSEG 104
            |.|.|::....:.||..|...|......|..:::.|: :..:...:...|  ..|.|.:||:.|.
Mouse   202 LLGNCYFFSKSQRNWNDAVTACKEVKAQLVIINSDEE-QTFLQQTSKAKG--PTWMGLSDLKKEA 263

  Fly   105 RFKYISSGKL-VRYMGDSNIVEPTQRSNL--DDCLEIRIRP-NVTVVLDVNCQEKKYFICEQNQM 165
            .:.::....| .|:....|..||   :|:  :||:|..... |     |..|:.||::||:::..
Mouse   264 TWLWVDGSTLSSRFQKYWNRGEP---NNIGEEDCVEFAGDGWN-----DSKCELKKFWICKKSAT 320

  Fly   166 KC 167
            .|
Mouse   321 PC 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 29/122 (24%)
Cd209bNP_081248.4 CLECT_DC-SIGN_like 195..317 CDD:153060 31/125 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167840917
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.