DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment lectin-46Ca and Clec10a

DIOPT Version :9

Sequence 1:	NP_652633.1	Gene:	lectin-46Ca / 53523	FlyBaseID:	FBgn0040093	Length:	328	Species:	Drosophila melanogaster
Sequence 2:	XP_008766090.1	Gene:	Clec10a / 64195	RGDID:	621158	Length:	307	Species:	Rattus norvegicus

Alignment Length:	147	Identity:	32/147 - (21%)
Similarity:	51/147 - (34%)	Gaps:	27/147 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly    32 CGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFG 96
            |...:..|..|.|::.......|..|...|..:..||..|:::    |..:::.:.:|....|.|
  Rat   175 CCPLHWMEHEGSCYWFSQSGKPWPEADKYCQLENSNLVAVNSL----AEQNFLQTHMGSVVTWIG 235

  Fly    97 GNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNL--------DDCLEIRI--RPNVTVVLDVN 151
            ..|  ..|.::::..   ..|........|.|..|.        :||.....  |.|     |..
  Rat   236 LTD--QNGPWRWVDG---TDYEKGFTHWAPKQPDNWYGHGLGGGEDCAHFTSDGRWN-----DDV 290

  Fly   152 CQEKKYFICEQNQMKCA 168
            ||....::||   ||.|
  Rat   291 CQRPYRWVCE---MKLA 304

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
lectin-46Ca	NP_652633.1	CLECT	43..162	CDD:153057	25/128 (20%)
Clec10a	XP_008766090.1	Lectin_N	21..166	CDD:281887
		Apolipoprotein	<63..166	CDD:279749
		CLECT_DC-SIGN_like	176..301	CDD:153060	28/141 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C166344318
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.930