DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Ncan

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_113841.2 Gene:Ncan / 58982 RGDID:619941 Length:1263 Species:Rattus norvegicus


Alignment Length:224 Identity:46/224 - (20%)
Similarity:72/224 - (32%) Gaps:78/224 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGF 90
            |||...|.:.: .:..|.|:.....:..|..|:.:|.|:..:|..|.:.|:.|.:     :..|.
  Rat  1029 EKDTEGCDRGW-HKFQGHCYRYFAHRRAWEDAERDCRRRAGHLTSVHSPEEHKFI-----NSFGH 1087

  Fly    91 DDFWFGGNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNL----DDCLEIRIRPNVTVVL--- 148
            ::.|.|.||...|..|::..:..| :|   .|..| .|..|.    :||        |.:|.   
  Rat  1088 ENSWIGLNDRTVERDFQWTDNTGL-QY---ENWRE-KQPDNFFAGGEDC--------VVMVAHEN 1139

  Fly   149 ----DVNCQEKKYFICEQNQMKCAVPAE------------------------DSGDGQKH----- 180
                ||.|.....::|::..:.|..|..                        |.|..|.|     
  Rat  1140 GRWNDVPCNYNLPYVCKKGTVLCGPPPAVENASLVGVRKVKYNVHATVRYQCDEGFSQHHVATIR 1204

  Fly   181 -------------------SHEHLHHFHH 190
                               ||....|.||
  Rat  1205 CRNNGKWDRPQIVCTKPRRSHRMRRHHHH 1233

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 30/129 (23%)
NcanNP_113841.2 Ig 40..161 CDD:472250
Ig strand B 54..58 CDD:409353
Ig strand C 74..78 CDD:409353
Ig strand E 122..126 CDD:409353
Ig strand F 136..141 CDD:409353
Ig strand G 154..157 CDD:409353
Link_domain_CSPGs_modules_1_3 159..253 CDD:239594
Link_domain_CSPGs_modules_2_4 260..355 CDD:239597
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..391
PHA03247 <381..709 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 453..499
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 556..616
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 689..713
EGF 959..989 CDD:394967
EGF_CA 993..1029 CDD:238011 46/224 (21%)
CLECT 1035..1158 CDD:470576 32/141 (23%)
CCP 1162..1218 CDD:153056 6/55 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1221..1263 5/13 (38%)
Blue background indicates that the domain is not in the aligned region.

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