DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and si:ch211-282j17.3

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001025393.1 Gene:si:ch211-282j17.3 / 568449 ZFINID:ZDB-GENE-041210-287 Length:370 Species:Danio rerio


Alignment Length:148 Identity:30/148 - (20%)
Similarity:58/148 - (39%) Gaps:30/148 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 PCGKPYL---RELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQ----- 87
            ||.|.::   ...|....:|. :.:||..||:.|.:..::|..|....:.:.:..::..:     
Zfish   123 PCSKTWIFICYNTNTGLVFVD-QLMNWRAAQSYCRQNHIDLVSVRNQNESQQLEKFINDRNSSGS 186

  Fly    88 ---VG-FDDFWFGGNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVL 148
               :| |.|.|...:  ||...|:|            .|..||.....:.:|  |.:..|.....
Zfish   187 AVWIGLFRDTWQWSD--QSNSSFRY------------WNTAEPNNAGGIQNC--IGMNQNAQGRW 235

  Fly   149 -DVNCQEKKYFICEQNQM 165
             |::|.....|:|.::::
Zfish   236 HDISCTGSFPFVCHEDKL 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 26/128 (20%)
si:ch211-282j17.3NP_001025393.1 CLECT 24..134 CDD:295302 3/10 (30%)
CLECT_1 139..249 CDD:153072 25/126 (20%)
CLECT 255..367 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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