DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and lectin

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001188329.1 Gene:lectin / 560034 ZFINID:ZDB-GENE-070912-438 Length:152 Species:Danio rerio


Alignment Length:174 Identity:40/174 - (22%)
Similarity:71/174 - (40%) Gaps:40/174 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 IVILTLMTVHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLAD 70
            :::|:|.::.:...::          |.:.:.| ...:||......:||..|:.||...|.||..
Zfish     8 LLLLSLFSMGNAAARR----------CTRQWSR-FGSRCFRYFSVPVNWVTAERNCQLLGGNLVS 61

  Fly    71 VST-MEDFKAVVHYVTSQV-GFDDFWFGGNDLQSEGRFKYISSGKLVRY----MGDSNIVEPTQR 129
            |.. ||:     .::.|.: ..:.|:.||.|.:.|..: :.|.|....|    .|:.|      .
Zfish    62 VQNGMEN-----DFLLSLIPNSERFFIGGYDGEDEENW-FWSEGSSFGYTNWCSGEPN------N 114

  Fly   130 SNLDDCLEI-----RIRPNVTVVLDVNCQEKKYFICEQNQMKCA 168
            .|.:.||||     |...|:.      |..::.:||.:|...|:
Zfish   115 MNTEHCLEINWTSDRCWNNLP------CSTEQGYICAKNLDGCS 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 34/129 (26%)
lectinNP_001188329.1 CLECT 34..146 CDD:153057 34/129 (26%)

Return to query results.
Submit another query.