DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and si:ch211-225k7.6

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001093462.1 Gene:si:ch211-225k7.6 / 558654 ZFINID:ZDB-GENE-070705-121 Length:359 Species:Danio rerio


Alignment Length:146 Identity:30/146 - (20%)
Similarity:58/146 - (39%) Gaps:35/146 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 NGKC----FYV------GI----KKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQV-GF 90
            :|||    |.:      |:    :.:||..||:.|.:..::|..|....:.:.:..::...: ..
Zfish   111 DGKCSDTWFVICYNMSRGLVFVNQTMNWRAAQSYCRQNHIDLVSVRNQNESQQLEKFINDSIPSR 175

  Fly    91 DDFWFG------GNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLD 149
            .|.|.|      .:| ||...|.|            .|..||....|.::|..::...|.... |
Zfish   176 SDVWIGLFRDWQWSD-QSNYSFSY------------WNTNEPNNYGNNENCTVLKENTNGHWA-D 226

  Fly   150 VNCQEKKYFICEQNQM 165
            ::|..:..|:|.::::
Zfish   227 ISCDCQFPFVCHEDKL 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 29/139 (21%)
si:ch211-225k7.6NP_001093462.1 CLECT 23..124 CDD:295302 4/12 (33%)
CLECT 127..238 CDD:295302 25/124 (20%)
CLECT 244..356 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D605458at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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