DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Reg4

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001004096.1 Gene:Reg4 / 445583 RGDID:1303341 Length:157 Species:Rattus norvegicus


Alignment Length:120 Identity:27/120 - (22%)
Similarity:48/120 - (40%) Gaps:7/120 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CFYVGIKKINWFGAQNNC--LRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSEGRF 106
            |:....|..||..|:..|  ...|.:||.|...::...:..|:|........|.|.:|.|....:
  Rat    40 CYGYFRKLRNWSHAELECQSYGNGSHLASVLNPKEASVISKYITGYQRSLPVWIGLHDPQKNASW 104

  Fly   107 KYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFICE 161
            ::| .|...:|...|    |..:|....|.|:..:..........|.::::|:|:
  Rat   105 QWI-DGSTNQYRPWS----PRTKSEARHCTEMNPKDKFLTWNKNGCTKRQHFLCK 154

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 27/120 (23%)
Reg4NP_001004096.1 CLECT_REG-1_like 29..155 CDD:153064 27/120 (23%)
Carbohydrate-binding. /evidence=ECO:0000250 97..101 2/3 (67%)
Carbohydrate-binding. /evidence=ECO:0000250 134..136 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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