DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and Clec3a

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001102369.1 Gene:Clec3a / 365009 RGDID:1306295 Length:196 Species:Rattus norvegicus


Alignment Length:184 Identity:48/184 - (26%)
Similarity:71/184 - (38%) Gaps:63/184 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKQSK---KEKD---KGPCGKPYLRELNG-------------------KCFYV--GIKKINWFGA 57
            :|.||   ||||   |....|.: ||:|.                   ||:..  |:|  ::..|
  Rat    30 RKHSKRRVKEKDGDLKSQVEKLW-REVNALKEMQALQTVCLRGTKVHKKCYLASEGLK--HYHEA 91

  Fly    58 QNNCLRKGLNLADVSTMEDFKAVVHY-VTSQVGFDDFWFGGNDLQSEGRFKYISSGKLVRYMGDS 121
            ..:|:.||..|......::..|:..| ..|..|.:|||.|.||:.:||:|..: .|..|.::   
  Rat    92 NEDCISKGGTLVVPRNSDEINALRDYSKRSLPGVNDFWLGINDMVTEGKFLDV-HGFAVSFL--- 152

  Fly   122 NIVEPTQRSNLDDCLEIRIRPN----VTVVL----------DVNCQEKKYFICE 161
                     |.|     |.:|:    ...||          |..|:..|.:|||
  Rat   153 ---------NWD-----RAQPSGGKRENCVLFSQSAQGKWSDEACRSSKRYICE 192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 36/136 (26%)
Clec3aNP_001102369.1 CLECT_tetranectin_like 68..193 CDD:153066 36/145 (25%)

Return to query results.
Submit another query.