DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Clec4a1

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001005890.1 Gene:Clec4a1 / 362430 RGDID:1359109 Length:243 Species:Rattus norvegicus


Alignment Length:153 Identity:24/153 - (15%)
Similarity:57/153 - (37%) Gaps:13/153 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVH 82
            |.|..|..|.....|.....:.....|::......:|..::..|..:|.:|..:.:.|:...:..
  Rat    97 CIKNHSSVEDKVWSCCPKNWKPFGSHCYFTSRDSASWSDSEEKCSHRGAHLLVIHSQEEQDFITD 161

  Fly    83 YVTSQVGFDDFWFGGNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNV--- 144
            .:..:.   .::.|.:|.:..|:::::......:.....:..||:  .|...|:.:...||:   
  Rat   162 TLNPRA---HYYVGLSDTEGHGKWQWVDQTPFNQNATSWHADEPS--GNKGFCVVLSYHPNLKGW 221

  Fly   145 --TVVLDVNCQEKKYFICEQNQM 165
              :|   ..|......:|:..|:
  Rat   222 GWSV---APCDGYHRLVCKMRQL 241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 18/123 (15%)
Clec4a1NP_001005890.1 CLECT_DC-SIGN_like 112..238 CDD:153060 18/133 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344354
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.030

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