DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and RGD1564571

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_221808.5 Gene:RGD1564571 / 304197 RGDID:1564571 Length:207 Species:Rattus norvegicus


Alignment Length:129 Identity:28/129 - (21%)
Similarity:60/129 - (46%) Gaps:15/129 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 GKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSEGRF 106
            |.|::....:..|..:...|...|..|..:.:.|: ::.:...:...|  :.|.|.:|.|.|.::
  Rat    89 GNCYFFSTFQKKWKESVIACKDMGAQLVVIKSYEE-QSFLQRTSKMKG--NTWIGLSDSQEEDQW 150

  Fly   107 KYISSGKLVRYMGDSNIVEPTQRSNL--DDCLEIRIRP-NVTVVLDVNCQEKKYFICEQNQMKC 167
            .:: .|..:::....:..||   :||  :||:|..... |     |::|..:|::||:::...|
  Rat   151 LWV-DGSPLQWRNYWSAGEP---NNLYDEDCVEFSSYGWN-----DISCSFEKFWICKKSASPC 205

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 26/121 (21%)
RGD1564571XP_221808.5 CLECT_DC-SIGN_like 80..200 CDD:153060 27/122 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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