DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Reg3d

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_038921.2 Gene:Reg3d / 30053 MGIID:1353426 Length:175 Species:Mus musculus


Alignment Length:150 Identity:32/150 - (21%)
Similarity:59/150 - (39%) Gaps:13/150 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KQSKKEKDKGPCGKPYLRELNGK-CFYVGIKKINWFGAQNNCLR--KGLNLADVSTMEDFKAVVH 82
            :||:|:........|...:..|. |:.:.::...|..|:.:|.:  .| :||.:.|..:...|..
Mouse    27 EQSQKKLSSPRISCPQEAQAYGSYCYLLILEPQTWANAEIHCQKHFSG-HLAFLLTYGEIIFVSS 90

  Fly    83 YV-TSQVGFDDFWFGGNDLQ-----SEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIR 141
            .| .|...|...|.|.:||.     :|..:|:.||..|..|..:   :.|:..::...|..:...
Mouse    91 LVKNSLTTFPYIWIGLHDLSLGSLPNENGWKWSSSDPLTFYNWE---IPPSMSAHHGYCAALSQA 152

  Fly   142 PNVTVVLDVNCQEKKYFICE 161
            .......|..|.....::|:
Mouse   153 SGYQKWRDYYCDTIFPYVCK 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 27/127 (21%)
Reg3dNP_038921.2 CLECT 40..173 CDD:295302 29/136 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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