DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Clec4m

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_038945074.1 Gene:Clec4m / 288378 RGDID:1561466 Length:336 Species:Rattus norvegicus


Alignment Length:132 Identity:31/132 - (23%)
Similarity:60/132 - (45%) Gaps:15/132 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSEG 104
            |.|.|:::...:.||..|...|..:...|..:::.|: :..:...:...|  ..|.|.:||::|.
  Rat   213 LLGNCYFLSKSQRNWNDAVRACKEEKAQLVIINSDEE-QTFLQLTSKAKG--PTWMGLSDLKNEA 274

  Fly   105 RFKYISSGKL-VRYMGDSNIVEPTQRSNL--DDCLEIRIRP-NVTVVLDVNCQEKKYFICEQNQM 165
            .:.::....| .|:....|..||   :|:  :||:|..... |     |..|:.||::|.:::..
  Rat   275 TWLWVDGSTLSSRFQKYWNRGEP---NNIGEEDCVEFAGDGWN-----DSKCELKKFWIFKKSAT 331

  Fly   166 KC 167
            .|
  Rat   332 AC 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 28/122 (23%)
Clec4mXP_038945074.1 CLECT_DC-SIGN_like 206..328 CDD:153060 30/125 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344326
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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