DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and Clec4a1

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_955015.1 Gene:Clec4a1 / 269799 MGIID:3036291 Length:245 Species:Mus musculus


Alignment Length:158 Identity:29/158 - (18%)
Similarity:60/158 - (37%) Gaps:23/158 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 CGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVH 82
            |.|..|..|.....|.....:..:..|::......:|..::..|..:|.:|..:.:.|:...:.:
Mouse    99 CVKNHSSVEDKVWSCCPKNWKPFDSHCYFTSRDTASWSKSEEKCSLRGAHLLVIQSQEEQDFITN 163

  Fly    83 YVTSQVGFDDFWFGGNDLQSEGRFKYISSGKLVRYMGDSNIV-----EPTQRSNLDDCLEIRIRP 142
            .:..:..   ::.|.:|.:..|:::::.....     |.|..     ||:  .|.:.|:.:...|
Mouse   164 TLNPRAA---YYVGLSDPKGHGQWQWVDQTPY-----DQNATSWHSDEPS--GNTEFCVVLSYHP 218

  Fly   143 NV-----TVVLDVNCQEKKYFICEQNQM 165
            ||     :|   ..|......|||..|:
Mouse   219 NVKGWGWSV---APCDGDHRLICEMRQL 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 22/128 (17%)
Clec4a1NP_955015.1 CLECT_DC-SIGN_like 114..240 CDD:153060 22/138 (16%)

Return to query results.
Submit another query.