DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Sftpd

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_037010.1 Gene:Sftpd / 25350 RGDID:3667 Length:374 Species:Rattus norvegicus


Alignment Length:234 Identity:59/234 - (25%)
Similarity:87/234 - (37%) Gaps:67/234 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   114 LVRYMGD--SNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFICEQNQMKCAVPAEDSGD 176
            ||:.:||  :.:...:|||..:.|         |:||           |...:.  .:|..|..|
  Rat    11 LVQPLGDLGAEMKTLSQRSITNTC---------TLVL-----------CSPTEN--GLPGRDGRD 53

  Fly   177 GQKHSHEHLHHFHHDAGQKDKQETGIKE----QSVESDSRP----ADNSNSTEIGVSKEKEAEGA 233
            |:            :..:.:|.:.|:..    ..:.....|    .:|.::.|.|...|:...|.
  Rat    54 GR------------EGPRGEKGDPGLPGPMGLSGLPGPRGPVGPKGENGSAGEPGPKGERGLVGP 106

  Fly   234 P-TPGDGGGTTEPVFENGMENAAEPIAEQEQTVPPGGTGPPAAADATGAATPAPDAAAAEGATPA 297
            | :||..|    |..:.|.......|..|.:..|.|..||.....|.|    ...:|.|:|  ||
  Rat   107 PGSPGISG----PAGKEGPSGKQGNIGPQGKPGPKGEAGPKGEVGAPG----MQGSAGAKG--PA 161

  Fly   298 ------AAPPAEGAPA-AEAATPA-PAAPEGEATPAPAA 328
                  .||..:|||. |.||.|| ||.|:|    ||.:
  Rat   162 GPKGERGAPGEQGAPGNAGAAGPAGPAGPQG----APGS 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 12/49 (24%)
SftpdNP_037010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..221 47/185 (25%)
gly_rich_SclB <60..>219 CDD:468478 43/151 (28%)
Surfac_D-trimer 223..268 CDD:286141
CLECT 261..374 CDD:470576
Blue background indicates that the domain is not in the aligned region.

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