DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Reg1a

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_036773.1 Gene:Reg1a / 24714 RGDID:3552 Length:165 Species:Rattus norvegicus


Alignment Length:122 Identity:28/122 - (22%)
Similarity:50/122 - (40%) Gaps:9/122 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 CFYVGIKKINWFGAQNNC--LRKGLNLADVSTME-DFKAVVHYVTSQVGFDDFWFGGNDLQSEGR 105
            |:|.....::|..|...|  :..|..::.:|..| :|.|.: ...|.....:.|.|.:|.::..|
  Rat    46 CYYFMEDHLSWAEADLFCQNMNSGYLVSVLSQAEGNFLASL-IKESGTTAANVWIGLHDPKNNRR 109

  Fly   106 FKYISSGKLVRYMG-DSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFICE 161
            :.: |||.|..|.. |:..   ...||...|:.:..........|.:|..:..|:|:
  Rat   110 WHW-SSGSLFLYKSWDTGY---PNNSNRGYCVSVTSNSGYKKWRDNSCDAQLSFVCK 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 28/122 (23%)
Reg1aNP_036773.1 CLECT 35..163 CDD:295302 28/122 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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