DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Reg3g

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_775120.1 Gene:Reg3g / 24620 RGDID:3256 Length:174 Species:Rattus norvegicus


Alignment Length:192 Identity:38/192 - (19%)
Similarity:69/192 - (35%) Gaps:54/192 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILPIVILTLMT------------VHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWF 55
            :||.|.||.|:            |.....|:.....:...|.|.   |.....|:.:.....:||
  Rat     1 MLPRVALTTMSWMLLSSLMLLSQVQGEDAKEDVPTSRISCPKGS---RAYGSYCYALFSVSKSWF 62

  Fly    56 GAQNNCLRK--GLNLADVSTMEDFKAVVHYVTSQV-----GFDDFWFGGND--LQSE---GRFKY 108
            .|...|.::  |..::.:|..|     ..:|:|.:     ...:.|.|.:|  |..|   |.:::
  Rat    63 DADLACQKRPSGHLVSVLSGSE-----ASFVSSLIKSSGNSGQNVWIGLHDPTLGQEPNRGGWEW 122

  Fly   109 ISSGKLVRY---------MGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFICE 161
             |:..::.|         :..|:....|:.|..     :|.|.|       ||..:..::|:
  Rat   123 -SNADVMNYFNWETNPSSVSGSHCGTLTRASGF-----LRWREN-------NCISELPYVCK 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 27/140 (19%)
Reg3gNP_775120.1 CLECT_REG-1_like 40..172 CDD:153064 30/153 (20%)
EPN. /evidence=ECO:0000250 114..116 1/1 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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