DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and Reg3g

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_035390.1 Gene:Reg3g / 19695 MGIID:109406 Length:174 Species:Mus musculus


Alignment Length:74 Identity:15/74 - (20%)
Similarity:27/74 - (36%) Gaps:15/74 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ILPIVILTLMT------------VHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWF 55
            :||.:.:|:|:            |.....||.:...:...|.|.   |.....|:.:.....||:
Mouse     1 MLPRITITIMSWMLLSCLMLLSQVQGEVAKKDAPSSRSSCPKGS---RAYGSYCYALFSVSKNWY 62

  Fly    56 GAQNNCLRK 64
            .|...|.::
Mouse    63 DADMACQKR 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 5/22 (23%)
Reg3gNP_035390.1 CLECT_REG-1_like 40..172 CDD:153064 8/35 (23%)
EPN. /evidence=ECO:0000250 114..116
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.