DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and Reg3a

DIOPT Version :10

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_035389.1 Gene:Reg3a / 19694 MGIID:109408 Length:175 Species:Mus musculus


Alignment Length:155 Identity:33/155 - (21%)
Similarity:55/155 - (35%) Gaps:19/155 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 KKQSKKEKDKGPCG-KPYLRELNGKCFYVGIKKINWFGAQNNC-LRKGLNLADVSTMEDFKAVVH 82
            :|:....:...|.| |.|    ...|:.:.:...:||.|...| .|...:|..:.:..:...|..
Mouse    30 QKEVPSPRTSCPMGYKAY----RSHCYALVMTPKSWFQADLVCQKRPSGHLVSILSGGEASFVSS 90

  Fly    83 YVTSQV-GFDDFWFGGND----LQSEGRFKYISSGKLVRYM---GDSNIVEPTQRSNLDDCLEIR 139
            .|..:| .:.|.|.|.:|    .|..|.....|:..::.|:   ||     |:...|...|..:.
Mouse    91 LVNGRVDNYQDIWIGLHDPTMGQQPNGGGWEWSNSDVLNYLNWDGD-----PSSTVNRGHCGSLT 150

  Fly   140 IRPNVTVVLDVNCQEKKYFICEQNQ 164
            .........|..|.....|:|:..|
Mouse   151 ASSGFLKWGDYYCDGTLPFVCKFKQ 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 27/127 (21%)
Reg3aNP_035389.1 CLECT 40..173 CDD:470576 31/141 (22%)
Sufficient to activate EXTL3. /evidence=ECO:0000250|UniProtKB:Q06141 103..118 4/14 (29%)

Return to query results.
Submit another query.