DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-46Ca and clec-242

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_507369.2 Gene:clec-242 / 190531 WormBaseID:WBGene00013471 Length:209 Species:Caenorhabditis elegans


Alignment Length:154 Identity:28/154 - (18%)
Similarity:51/154 - (33%) Gaps:69/154 - (44%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 NWFGAQNN--CLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSEGRFKYISSGKLV 115
            :|.||:..  |:.: |..|..:.:..|:               |..|:...::|....:|.|:  
 Worm   105 HWLGARRTAACIGQ-LVTATCTRLNSFE---------------WTDGSATGTDGFNWRLSDGE-- 151

  Fly   116 RYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQ-EKKYFICE--------QNQMK--CAV 169
                                      || .:.|:|..| |..:|..:        ||.:|  |.:
 Worm   152 --------------------------PN-NLFLNVFIQYENSWFFFQYWYRQVILQNTLKLCCNI 189

  Fly   170 PAEDSGDGQKH-----SHEHLHHF 188
            .      |.|:     |:.:::||
 Worm   190 L------GSKNSTIGLSYYYINHF 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 19/119 (16%)
clec-242NP_507369.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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