DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and clec-39

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_507236.3 Gene:clec-39 / 188899 WormBaseID:WBGene00012022 Length:405 Species:Caenorhabditis elegans


Alignment Length:176 Identity:40/176 - (22%)
Similarity:61/176 - (34%) Gaps:54/176 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNGKCFYV---------GIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWF 95
            :|.||:.:         ..|..|.:|        |..|..:.:.:|.:|::|:|..| ..|..|.
 Worm   149 VNNKCWKLVTSNQARPDADKICNGYG--------GATLFSIKSEQDNRAMIHFVKGQ-DIDFLWS 204

  Fly    96 GGNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKYFI- 159
            |          ...|:|:.:..:.|.........||..|..     ||:..   .||   .||| 
 Worm   205 G----------LLCSAGEPISCIWDIENGSTANYSNFADGF-----PNIVY---GNC---VYFIT 248

  Fly   160 ------------CEQ-NQMKCAVPAEDSG-DGQKHSHEHLHHFHHD 191
                        |.| ....|.:||...| ||.|:::|...:...|
 Worm   249 SGDEAGQWGNEQCGQVMNFVCELPATFQGKDGCKNNYEKSCYLRFD 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 29/140 (21%)
clec-39NP_507236.3 CLECT 142..270 CDD:214480 31/150 (21%)
CLECT 285..397 CDD:214480 2/10 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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