DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and clec-28

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001023950.1 Gene:clec-28 / 186005 WormBaseID:WBGene00009857 Length:402 Species:Caenorhabditis elegans


Alignment Length:203 Identity:36/203 - (17%)
Similarity:70/203 - (34%) Gaps:46/203 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 LNGKCFYVGIKKINWFGAQNNCLR-KGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFGGNDLQSE 103
            :..||:.:...:.|...|...|.. .|..|..:...:|.:||:.::..| ..::.|.|   |...
 Worm   153 VGNKCWKLVTVQKNRADADQACFSLGGSTLFSIRNDQDNQAVLEFLKDQ-HVENLWTG---LNCV 213

  Fly   104 GRFKY-----ISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDV------NCQEKKY 157
            |...:     :.||....|   :|..:....:....|:..:     |.....      :|.|...
 Worm   214 GINPFTCTWDVKSGTTSAY---NNFADGYPNNMAGGCIYYK-----TTGTQAGQWSSGSCNEIMS 270

  Fly   158 FICEQNQMKCAVPAEDSGDGQKHSHEHLHHFHHDAGQKDKQETGIKEQSVESDSR---PADNSNS 219
            |:||       :||.......|:::.:..:..:|            :..:.||::   .:..||.
 Worm   271 FVCE-------LPATIYDSTCKYNYNNYCYTPYD------------QLQISSDAQSICASSGSNL 316

  Fly   220 TEIGVSKE 227
            ..|..:.|
 Worm   317 ATIHSANE 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 25/130 (19%)
clec-28NP_001023950.1 CLECT 146..274 CDD:214480 24/132 (18%)
CLECT 288..396 CDD:214480 7/49 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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