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Protein Alignment lectin-46Ca and Reg3a
DIOPT Version :9
Sequence 1: | NP_652633.1 |
Gene: | lectin-46Ca / 53523 |
FlyBaseID: | FBgn0040093 |
Length: | 328 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001139318.1 |
Gene: | Reg3a / 171162 |
RGDID: | 621401 |
Length: | 174 |
Species: | Rattus norvegicus |
Alignment Length: | 165 |
Identity: | 35/165 - (21%) |
Similarity: | 59/165 - (35%) |
Gaps: | 17/165 - (10%) |
- Green bases have known domain annotations that are detailed below.
Fly 9 LTLMTVHSGCGKKQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNC-LRKGLNLADVS 72
|.:..|.....:|.....:...|.|....|.. |:.:.....:||.|...| .|...:|..:.
Rat 18 LFIFQVRGEDSQKAVPSTRTSCPMGSKAYRSY---CYTLVTTLKSWFQADLACQKRPSGHLVSIL 79
Fly 73 TMEDFKAVVHYVTSQVGFD-DFWFGGND----LQSEGRFKYISSGKLVRYM---GDSNIVEPTQR 129
:..:...|...||.:|..: |.|.|.:| .|..|.....|:..::.|: || |:..
Rat 80 SGGEASFVSSLVTGRVNNNQDIWIGLHDPTMGQQPNGGGWEWSNSDVLNYLNWDGD-----PSST 139
Fly 130 SNLDDCLEIRIRPNVTVVLDVNCQEKKYFICEQNQ 164
.|..:|..:..........|.:|..:..|:|:..|
Rat 140 VNRGNCGSLTATSEFLKWGDHHCDVELPFVCKFKQ 174
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
lectin-46Ca | NP_652633.1 |
CLECT |
43..162 |
CDD:153057 |
28/127 (22%) |
Reg3a | NP_001139318.1 |
CLECT |
39..172 |
CDD:295302 |
31/140 (22%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1509611at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.010 |
|
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