DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Fcer2

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:NP_001029096.1 Gene:Fcer2 / 171075 RGDID:619997 Length:331 Species:Rattus norvegicus


Alignment Length:134 Identity:33/134 - (24%)
Similarity:53/134 - (39%) Gaps:15/134 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 CGKPYLRELNGKCFYVGIKKINWFGAQNNCLRKGLNLADVSTMEDFKAVVHYVTSQVGFDDFWFG 96
            |.|.:| ....||:|.|.....|..|:..|......|..:.:.::...::.::..:    :.|.|
  Rat   186 CPKDWL-HFQQKCYYFGEGSKQWIQAKFTCSDLEGRLVSIHSQKEQDFLMQHINKK----ESWIG 245

  Fly    97 GNDLQSEGRFKYISSGKLVRYMGDSNIVEPTQRSNLDDCLEIRIRPNVTVVLDVNCQEKKY---F 158
            ..||..||.|.: ..|..|.|...|. .||......:||:.:|......   |..|  :.|   :
  Rat   246 LQDLNMEGEFVW-PDGSPVGYSNWSP-GEPNNGGQGEDCVMMRGSGQWN---DAFC--RSYLDAW 303

  Fly   159 ICEQ 162
            :|||
  Rat   304 VCEQ 307

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 28/121 (23%)
Fcer2NP_001029096.1 RILP-like <60..170 CDD:304877
CLECT_DC-SIGN_like 186..306 CDD:153060 30/131 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166344374
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR22802
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.940

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