DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-46Ca and Clec19a

DIOPT Version :9

Sequence 1:NP_652633.1 Gene:lectin-46Ca / 53523 FlyBaseID:FBgn0040093 Length:328 Species:Drosophila melanogaster
Sequence 2:XP_038953831.1 Gene:Clec19a / 100909498 RGDID:6503302 Length:234 Species:Rattus norvegicus


Alignment Length:105 Identity:27/105 - (25%)
Similarity:42/105 - (40%) Gaps:22/105 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KQSKKEKDKGPCGKPYLRELNGKCFYVGIKKINWFGAQNNC-----LRKGLNLADVSTMEDFKAV 80
            ::|:..:.||||.:           :..|.|| |..|..:|     .||...:..:.:.|:...|
  Rat    43 EKSRLLEFKGPCXR-----------FFPINKI-WAEANIHCPQFTASRKSAKMVSIHSWEESVFV 95

  Fly    81 VHYVTSQVGFD---DFWFGGNDLQSEGRFKYISSGKLVRY 117
            ...|.|.|. |   |...|....:.||:|:: |.|....|
  Rat    96 YDLVNSCVP-DIPADTCMGLRVHRQEGQFEW-SDGSPYGY 133

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-46CaNP_652633.1 CLECT 43..162 CDD:153057 22/83 (27%)
Clec19aXP_038953831.1 CLECT 49..194 CDD:413318 26/99 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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