DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-33A and Clec5a

DIOPT Version :10

Sequence 1:NP_001097145.1 Gene:lectin-33A / 53516 FlyBaseID:FBgn0040096 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_001102847.1 Gene:Clec5a / 679787 RGDID:1584755 Length:190 Species:Rattus norvegicus


Alignment Length:144 Identity:26/144 - (18%)
Similarity:48/144 - (33%) Gaps:24/144 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ANAQTCPLPFSRVGNKCYHVSLQEANWHVADRSCRKLGAELMVLDNQEDKLLTTTFLKSMGLSFT 83
            ::...||..:.....:|:..|..|:.|..:...|...|:.|.::|..:.            |.|.
  Rat    68 SSGTACPNNWDFHQGRCFFFSTSESPWKNSRDYCATKGSTLAIVDTPKK------------LKFL 120

  Fly    84 QSWHHSVWAGINCLGNRRTFLLARNGETVPYLNWV--PLEPNNASPEEDCVGFANYNGAFGYHDI 146
            |.     .||..   |....|:.:.||  ....||  .:...|.:.:|.............:...
  Rat   121 QD-----RAGAE---NYFIGLIRQPGE--KKWRWVNNSVFKGNVTNQEQNFNCVTIGLTMTFDAA 175

  Fly   147 ECKVQFPYVCQREP 160
            .|.:.:.::|:..|
  Rat   176 SCDISYRWICETTP 189

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-33ANP_001097145.1 CLECT 24..157 CDD:214480 24/134 (18%)
Clec5aNP_001102847.1 CLECT_NK_receptors_like 73..186 CDD:153063 24/134 (18%)

Return to query results.
Submit another query.