DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-33A and clec19a

DIOPT Version :9

Sequence 1:NP_001097145.1 Gene:lectin-33A / 53516 FlyBaseID:FBgn0040096 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_001315005.1 Gene:clec19a / 570145 ZFINID:ZDB-GENE-080917-46 Length:207 Species:Danio rerio


Alignment Length:160 Identity:37/160 - (23%)
Similarity:56/160 - (35%) Gaps:44/160 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 TCPLPFSRVGNKCYHVSLQEANWHVADRSCRKLGAELMVLDNQEDKLLTTTFLKSMGLSFTQSWH 87
            ||||.::.....||........|..||..|.:.                :...||..|:...||.
Zfish    61 TCPLFWTEFEGYCYRFFPLNRTWAEADLYCAEF----------------SNGHKSAKLTSVHSWE 109

  Fly    88 HSV-----------------WAGINCLGNRRT--FLLARNGETVPYLNWVPLEPNNA----SPEE 129
            .:|                 |.|::   :||.  .:...:|....|..|...:|::.    ..||
Zfish   110 ENVFVYDLVNSRMPGIPTDIWIGLH---DRRQEGTMEWTDGSPFEYSYWDGNQPDDGIHRIPEEE 171

  Fly   130 DCVG-FANYNGAF-GYHDIECKVQFPYVCQ 157
            |||. :...|.|. .::|..|...||:||:
Zfish   172 DCVEIWYRQNSALRSWNDNNCDKAFPFVCK 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-33ANP_001097145.1 CLECT 24..157 CDD:214480 35/157 (22%)
clec19aNP_001315005.1 CLECT_CEL-1_like 62..202 CDD:153059 36/159 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 59 1.000 Inparanoid score I5404
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.970

Return to query results.
Submit another query.