DRSC/TRiP Functional Genomics Resources

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Protein Alignment lectin-33A and Sftpd

DIOPT Version :9

Sequence 1:NP_001097145.1 Gene:lectin-33A / 53516 FlyBaseID:FBgn0040096 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_037010.1 Gene:Sftpd / 25350 RGDID:3667 Length:374 Species:Rattus norvegicus


Alignment Length:176 Identity:48/176 - (27%)
Similarity:66/176 - (37%) Gaps:37/176 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKGSFGFLLIALI---LECANA--QTCPLPFSR------------VGNKCYHVSLQEANWHVADR 50
            |||..|....|.:   :|..|.  |.....|||            ||:|.:..:..|..:..|..
  Rat   214 IKGESGLPDSAALRQQMEALNGKLQRLEAAFSRYKKAALFPDGQSVGDKIFRAANSEEPFEDAKE 278

  Fly    51 SCRKLGAEL----MVLDNQEDKLLTTTFLKSMGLSFTQSWHHSVWAGINCLGNRRTFLLARNGET 111
            .||:.|.:|    ...:|...:.|.|...|:..||.|.            :|....|... .||.
  Rat   279 MCRQAGGQLASPRSATENAAVQQLVTAHSKAAFLSMTD------------VGTEGKFTYP-TGEA 330

  Fly   112 VPYLNWVPLEPNNASPEEDCVGFANYNGAFGYHDIECKVQFPYVCQ 157
            :.|.||.|.||||....|:||.... ||.  ::|..|..|...:|:
  Rat   331 LVYSNWAPGEPNNNGGAENCVEIFT-NGQ--WNDKACGEQRLVICE 373

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-33ANP_001097145.1 CLECT 24..157 CDD:214480 39/148 (26%)
SftpdNP_037010.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 40..221 4/6 (67%)
Collagen 41..89 CDD:189968
Collagen 66..124 CDD:189968
Collagen 114..172 CDD:189968
Surfac_D-trimer 223..268 CDD:286141 10/44 (23%)
CLECT 261..374 CDD:295302 35/129 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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