DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-33A and clec-34

DIOPT Version :9

Sequence 1:NP_001097145.1 Gene:lectin-33A / 53516 FlyBaseID:FBgn0040096 Length:177 Species:Drosophila melanogaster
Sequence 2:NP_507234.1 Gene:clec-34 / 180116 WormBaseID:WBGene00012023 Length:363 Species:Caenorhabditis elegans


Alignment Length:154 Identity:35/154 - (22%)
Similarity:66/154 - (42%) Gaps:16/154 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 NAQTCPLPFSRVGNKCYHVSLQEANWHVADRSCRKL-GAELMVLDNQEDKLLTTTFLKSMGLSFT 83
            |..||.:.|:.:.:||:.:.........||.:|.:. |:.|..:.|:::......|:.:.|:.  
 Worm   100 NNITCAVGFTYINHKCWRLFTDLQTRENADGACMRYGGSTLFSIRNEQENNAMLGFMLNAGVD-- 162

  Fly    84 QSWHHSVWAGINCLGNRRTFLLA---RNGETVPYLNWVPLEPNNASPEEDCVGFANYNGAFG-YH 144
                 ::|.|:.|:| :.||...   .:|.|..|.::....|:|.  ..:||.|.......| :.
 Worm   163 -----NLWTGLICVG-KTTFSCTWDMESGTTSVYNSFASESPDNT--YGNCVYFIITGTQAGQWK 219

  Fly   145 DIECKVQFPYVCQREP-AEDYLCL 167
            ...|.:...:||:..| ..|..|:
 Worm   220 SGLCNMTMSFVCELPPTVHDKNCI 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-33ANP_001097145.1 CLECT 24..157 CDD:214480 29/137 (21%)
clec-34NP_507234.1 CLECT 104..232 CDD:214480 29/137 (21%)
CLECT 246..356 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 47 1.000 Domainoid score I8088
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1509611at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X59
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

Return to query results.
Submit another query.