DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment lectin-33A and asgr1

DIOPT Version :9

Sequence 1:NP_001097145.1 Gene:lectin-33A / 53516 FlyBaseID:FBgn0040096 Length:177 Species:Drosophila melanogaster
Sequence 2:XP_002935447.4 Gene:asgr1 / 100487251 XenbaseID:XB-GENE-5998517 Length:211 Species:Xenopus tropicalis


Alignment Length:119 Identity:25/119 - (21%)
Similarity:51/119 - (42%) Gaps:31/119 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 CPLPFSRVGNKCYHVSLQEANWHVADRSCRKLGAELMVLDNQEDKLLTTTFLKSMGLSFTQSWHH 88
            |...:.:....||::.....||..|...|:.:.::|:|::::.::    .||:|:      :...
 Frog    91 CDSGWKKFDGNCYYIVTTMKNWTEARAICKSMNSDLVVINSEREQ----NFLESL------TDES 145

  Fly    89 SVWAGINCLGNRRTFLLARNGETVPYLN----------WVPLEPNNASPEEDCV 132
            ..|.|           |.|:.:...:::          |:..||||:..:||||
 Frog   146 EFWIG-----------LKRDKDRWRWVDGTLHNPSEGFWMKGEPNNSGGKEDCV 188

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lectin-33ANP_001097145.1 CLECT 24..157 CDD:214480 25/119 (21%)
asgr1XP_002935447.4 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000024
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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