DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and XIE

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_175858.1 Gene:XIE / 841898 AraportID:AT1G54560 Length:1529 Species:Arabidopsis thaliana


Alignment Length:1728 Identity:490/1728 - (28%)
Similarity:764/1728 - (44%) Gaps:378/1728 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 GEYVWVKPQNTT-------------SEFAVPFGARIVRTEKTQTLVCDDRNKQFWVPAGDVLKAM 61
            |.:||::..:..             .|.....|.:|  |.|...:...|..    .|||      
plant    13 GSHVWIEDSDVAWIDGLVEKINGQDVEVQATNGKKI--TAKLSKIYPKDME----APAG------ 65

  Fly    62 HITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILP-IYTNREIQLYR 125
                  .|:||..|..|.|..:|:||:.||....||||||::|:||||:|.|| ||....:|.|:
plant    66 ------GVDDMTKLSYLHEPGVLQNLKIRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYK 124

  Fly   126 NKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGK----HSW 186
            .....||.||:||::|.|::.:....::..:::||||||||||:||::::|||.:.|:    ...
plant   125 GAPFGELSPHVFAVADVAYRAMINEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAVTEGRT 189

  Fly   187 IEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDE 251
            :|||::|:||::|||||||||||:|||||||::||:|..||.|.||.::.||||:||:...|..|
plant   190 VEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKQGRISGAAVRTYLLERSRVCQISDPE 254

  Fly   252 RNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKP 316
            ||||.|| :|......|.|:.||..  |..:|||.|..||.|.|..||.|:...|.||.::....
plant   255 RNYHCFY-LLCAAPQEELEKYKLGH--PKTFHYLNQSKCFELVGISDAHDYIATRRAMDIVGMSE 316

  Fly   317 EEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTP-NLQRVAQLLGIPISALNAALTQRTIF 380
            :|..:|..::||||||||:.||..:..:.:..:.|.:. :|..||:||...:.||..||.:|.:.
plant   317 KEQEAIFRVVAAILHLGNVEFTKGKEVDSSVPKDDKSKFHLNTVAELLMCDVKALEDALCKRVMV 381

  Fly   381 VHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFD 445
            ...|.:..||..::|:..||...|::|..:|..:|.:||.:|.:.... .:.||||||:|||:|.
plant   382 TPEEVIKRSLDPQSALISRDGLAKTIYSRLFDWLVEKINVSIGQDATS-RSLIGVLDIYGFESFK 445

  Fly   446 NNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLI 510
            .|||||.|||:.||.|||.|..|:|||||:||..|.|:|.:|||.|||.:||||..||..:::|:
plant   446 TNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEAIDWSYIEFVDNQDVLDLIEKKPGGIVALL 510

  Fly   511 DEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSG 575
            ||...|||.|.:|...||:........::|.|.::|. |.:.||||.|.|....||:||:|....
plant   511 DEACMFPKSTHETFANKLYQTFKTHKRFIKPKLSRTD-FAVAHYAGEVQYQSDLFLDKNKDYVIP 574

  Fly   576 DLRTLVQRSTNKYLVDIFPHEMPMDTAK--KQPTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNE 638
            :.:.|:..|...::|.:|| .:|.:|:|  |..::..:|:..|..||.||:...|::|||:|||.
plant   575 EHQDLLGASKCPFVVGLFP-PLPEETSKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNN 638

  Fly   639 YKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPV--GPLEQCDCRKL 701
            ..:|..|:....::|||..|::|..||..||||.|..:..|:.|:.||.|..  |..|:   :..
plant   639 LLKPAVFENVNIMQQLRCGGVLEAIRISCAGYPTRKPFFEFINRFGLLYPRALEGNYEE---KAA 700

  Fly   702 ARQICE-VALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYR 765
            |::|.: :.|   ...|.||||:|||....|.|:.:|:.::..:...|||.||....:|.....|
plant   701 AQKILDNIGL---KGYQVGKTKVFLRAGQMAELDARRTMVLSAAAKKIQRRIRTHQAQRRFILLR 762

  Fly   766 EAIITVQRYWRGRL-------------------------QRRKYQ-------VMRQGFHRLGACI 798
            :|.|::|...||||                         .|:.|:       |::.|   |.|..
plant   763 KATISLQALCRGRLSSKIFDNLRRQAAAVKIQKNARRLHSRKSYKNLHVAALVVQTG---LRAMA 824

  Fly   799 AAQQL---------TTKFTMVRCR--TIKLQALSRGYLVRKDFQKKLLERRKQNQLK----KEEL 848
            |.:|.         ||.....||.  |:..:.|.:|.::.:...:..|.||:..|||    :...
plant   825 AHKQFRFRKQTKAATTIQAQFRCHRATLYFKKLKKGVILSQTRWRGKLARRELRQLKMASRETGA 889

  Fly   849 LKLAK---MKEAEELLRLQQLKEQKE---REQREQQEKRLQ---EEQRLKAEAAARNALAMAAVQ 904
            ||.||   .|:.|||....||:::..   .|::.|:.|:||   ||.|.|.:..  |.|   .|:
plant   890 LKEAKDMLEKKVEELTYRAQLEKRSRVDLEEEKNQEIKKLQSSLEEMRKKVDET--NGL---LVK 949

  Fly   905 QKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTIPESPG-TIDVESSK 968
            ::...|...:|||...|          .|.::|.   .|:...|:|.     |..| ..::|..|
plant   950 EREAAKKAIEEAPPVVT----------ETQVLVE---DTQKIEALTE-----EVEGLKANLEQEK 996

  Fly   969 QMVDDVFRFLNDEPDAA---LRKLNNISSGDTIRLPKSVP------NNIDTSDFSYLKYAAT--- 1021
            |..||..|..::..:::   .:||.: :.....:|.:||.      ||:: |:...|:..|.   
plant   997 QRADDATRKFDEAQESSEDRKKKLED-TEKKAQQLQESVTRLEEKCNNLE-SENKVLRQQAVSIA 1059

  Fly  1022 ---YFGG--------GATAQHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTL 1075
               :..|        |:.:.|.....:.||..|.|.|:..              ||.:|...|  
plant  1060 PNKFLSGRSRSILQRGSESGHLSVDARPSLDLHSHSINRR--------------DLSEVDDKP-- 1108

  Fly  1076 HVFDNENLMSDLASLLNTSDSYKPRLFVR--------QSQRRIPKPLASGEKEAQEFYQ---HWL 1129
                        ...||........|.:|        |.:|.:         .|...|:   .|.
plant  1109 ------------QKSLNEKQQENQELLIRCIVQHLGFQGKRPV---------TACIIYKCLLQWR 1152

  Fly  1130 NVP---TSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRSSYSRGWLLLSLCLSC----- 1186
            :..   ||..::|...||.. |:....:.|||     .:|    |:.|...|||...|..     
plant  1153 SFEVERTSVFDRIIQTIGQA-IETQDNNNILA-----YWL----SNASTLLLLLQRTLKASGAAG 1207

  Fly  1187 FPPSKEFEPHLRSFMKQGTAQLQATPSLQRLERTLVNGPRCQPPSLFELHAIRGRHPLRLDIHLM 1251
            ..|.:........|.:. |...:.||  |.:...::||      .:..|..:..::|.     |:
plant  1208 MAPQRRRSSSATLFGRM-TQSFRGTP--QGVNLAMING------GVDTLRQVEAKYPA-----LL 1258

  Fly  1252 DGQQRRLQVDAASTAREAVNQLCQGMGLTDTFGFGLVM-SLNGKLMPL----------------- 1298
            ..||....|:..                     :|::. :|..::.||                 
plant  1259 FKQQLTAYVEKI---------------------YGMIRDNLKKEISPLLGLCIQAPRTSRASLVK 1302

  Fly  1299 GAGQEHVLDAISECEQRQLDAPWKLYIRKEMFATWYDPSMDPKATQLIYKQILNGLKCGEYRCRS 1363
            ||.:    ...:...|:.|.|.|:..::.                   ....||.||.       
plant  1303 GASR----SVGNTAAQQALIAHWQGIVKS-------------------LTNFLNNLKS------- 1337

  Fly  1364 EKDIAMVCALACFVEYGPGEILRLKPSEITAFVPSDLLAPGERAIENWSRLI---AATYEKSSYV 1425
                          .:.|..::|...::|.:|:...|..         |.|:   ..::....||
plant  1338 --------------NHVPPFLVRKVFTQIFSFINVQLFN---------SLLLRRECCSFSNGEYV 1379

  Fly  1426 KEEQNDLLLEAQKRAKEDICL-----FAHLSW-PMRHSRL---FEVVRKEGPKLQSDELMLGINS 1481
            |....:|         |..|.     :|..|| .::|.|.   |.|:.:: ||...||:     |
plant  1380 KAGLAEL---------EHWCYNATDEYAGSSWDELKHIRQAIGFLVIHQK-PKKTLDEI-----S 1429

  Fly  1482 AGLFLIDETEQV--LASCCFSEVLKVHVESDD---KLHVMTFQHVNFVLQCSSAQDANEVINYML 1541
            ..|..:...:|:  :::..:.:....|..|.|   .:.|:..:..|..:..|...|.:..|.:.:
plant  1430 HELCPVLSIQQLYRISTMYWDDKYGTHSVSPDVIANMRVLMTEDSNNAVSNSFLLDDDSSIPFSV 1494

  Fly  1542 DNLRQRSSYGVALDPVVEGDLEDCLVLNPGDLIEFEAG 1579
            |:|.:      :::.:..||:|      |..||...:|
plant  1495 DDLSK------SMERIEIGDVE------PPPLIRENSG 1520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 283/685 (41%)
MYSc_Myo7 81..726 CDD:276832 273/655 (42%)
IQ 765..785 CDD:197470 9/44 (20%)
DUF4355 827..>887 CDD:290964 23/72 (32%)
MyTH4 1031..1239 CDD:295320 44/226 (19%)
B41 1248..1429 CDD:214604 28/201 (14%)
FERM_N 1248..>1288 CDD:286467 5/39 (13%)
FERM_B-lobe 1342..1429 CDD:271216 14/89 (16%)
PH-like 1454..1547 CDD:302622 21/100 (21%)
MyTH4 1674..1819 CDD:214535
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
XIENP_175858.1 Myosin_N 14..51 CDD:280832 6/38 (16%)
MYSc 66..734 CDD:214580 283/679 (42%)
MYSc_Myo11 79..723 CDD:276835 273/655 (42%)
type_I_hlyD 723..>980 CDD:130902 69/277 (25%)
ApoLp-III_like <889..1026 CDD:304399 42/160 (26%)
TPR_MLP1_2 907..1054 CDD:285204 41/171 (24%)
bZIP <1016..1052 CDD:304365 8/37 (22%)
MyosinXI_CBD 1114..1495 CDD:271259 86/502 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 530 1.000 Domainoid score I63
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8405
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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