Protein Alignment Myo28B1 and VIIIA

DIOPT Version :10

• Sequence 1: NP_723294.1
• Gene: Myo28B1 / 53515
• FlyBaseID: FBgn0040299
• Length: 2122
• Species: Drosophila melanogaster
• Sequence 2: NP_175453.2
• Gene: VIIIA / 841458
• AraportID: AT1G50360
• Length: 1153
• Species: Arabidopsis thaliana
• Alignment Length: 990
• Identity: 359/990 - (36%)
• Similarity: 526/990 - (53%)
• Gaps: 162/990 - (16%)

  Fly     5 YSPRKGEYVWV----------KPQNTTSEFAVPFGARIVRTE------KTQTLVCDDRNKQFWVP 53
            |:.:|....||          |..:|:.|.:|     ||.||      |::||          ||
plant   101 YARKKVLQFWVQLPNGNWELGKIMSTSGEESV-----IVVTEGKVLKVKSETL----------VP 150

  Fly    54 AG-DVLKAMHITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYT 117
            |. |:|        :.|:|::.|..|.|..:|.||:.||.:.:|||..|.:|||:||::.:|:|.
plant   151 ANPDIL--------DGVDDLMQLSYLNEPAVLYNLEYRYNQDMIYTKAGPVLVAVNPFKEVPLYG 207

  Fly   118 NREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISG 182
            ||.|:.||.:|  ...||::||:|.|.:.:.|.:.||.::|||||||||||:.|:.:|||||:.|
plant   208 NRNIEAYRKRS--NESPHVYAIADTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGG 270

  Fly   183 KHSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQ 247
             .|.||.:|::.|||:||||||||:||||||||||.|||.|:..|.|.||:||.:||||||:|..
plant   271 -GSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGAQIQTFLLEKSRVVQC 334

  Fly   248 SRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVL 312
            :..||:|||||.:.||.|...||:|.|  .|..||:||.|..|:::.|..||:.|..::.|:.::
plant   335 TEGERSYHIFYQLCAGASPTLREKLNL--TSAKQYNYLKQSNCYSINGVDDAERFHAVKEALDIV 397

  Fly   313 SFKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQR 377
            ....|:..::.::|||:|.|||:.||..:..|....|.|:  :|..||:|:|..|:.|..||::|
plant   398 HVSKEDQENVFAMLAAVLWLGNVSFTIIDNENHVEPEPDE--SLSTVAKLIGCNINELKLALSKR 460

  Fly   378 TIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFE 442
            .:.|:.:.:...|:...||:.|||..||:|..:|..:|.:||:::.....:...||.:|||:|||
plant   461 NMRVNNDTIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFE 525

  Fly   443 NFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLM 507
            :|:.|||||.|||||||.|||.|..|:||:||:||..:.|:|..::|:|||:.|.|...||:.|:
plant   526 SFNKNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTRVDFEDNQECLSLFEKKPLGLL 590

  Fly   508 SLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDS 572
            ||:||||.||.|||.||..||. ||.|.:...:|  .:...|.:.||||.|.|...||||||||.
plant   591 SLLDEESTFPNGTDLTLANKLK-QHLNDNSCFRG--DRGKAFTVAHYAGEVTYETTGFLEKNRDL 652

  Fly   573 FSGDLRTLVQRSTNKYLVDIFPHEM----------PMDTA----KKQPTLCVKFRNSLDMLMRTL 623
            ...|...|:. |.:.:|...|...|          |:..|    .::.::..||:..|..||:.|
plant   653 LHSDSIQLLS-SCSCHLPQAFASSMLIYSEKPLVGPLHKAGGADSQRLSVATKFKGQLFQLMQRL 716

  Fly   624 SQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVP 688
            ....|:||||||||..:....:::.|.::|||..|::|..||.|:|:|.|..:..|..||..|:
plant   717 GNTTPHFIRCIKPNNVQSAGLYEQGLVLQQLRCCGVLEVVRISRSGFPTRMFHHKFARRYGFLL- 780

  Fly   689 PVGPLEQCDCRKLARQICEVA---------LPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKS 744
                ||..    .|:....|:         ||  ...|.|.||||.|......||..|:: .|..
plant   781 ----LENI----AAKDPLSVSVAILHQFNILP--EMYQVGYTKLFFRTGQIGVLEDTRNR-TLHG 834

  Fly   745 IVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGAC--------IAAQ 801
            |:.:|...|....|..:|..:..|..:|.:.||...|::|..:.|. ||..|.        ||:|
plant   835 ILRLQSYFRGHQARCRLKELKTGITILQSFVRGEKMRKEYTELLQR-HRASAAIQSHVKRRIASQ 898

  Fly   802 QLTTKFTMVRCRTIKLQALSRGYLVRK-----------------------------DFQKKLL-- 835
            |.  |.|:.....|  |:..||.|||:                             |.|:::|
plant   899 QY--KATVDASAVI--QSAIRGELVRRCAGDIGWLSSGGTKRNESDEVLVKASYLSDLQRRVLRT 959

  Fly   836 -----ERRKQNQLKKEELLKL--------AKMKEAEELLRLQQLKEQKEREQREQQEKRLQE--- 884
                 |:.::|.:.::.:.:.        .|||..||:.              ::|.|.||.
plant   960 EAALREKEEENDILRQRVQQYDNRWSEYETKMKSMEEIW--------------QKQMKSLQSSLS 1010

  Fly   885 --EQRLKAEAAARNA 897
              ::.|:.|.:|||:
plant  1011 IAKKSLEVEDSARNS 1025

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Myo28B1	NP_723294.1	MYSc_Myo7	81..726	CDD:276832	282/667 (42%)
		IQ	765..785	CDD:197470	5/19 (26%)
		Atrophin-1	<820..>946	CDD:460830	24/127 (19%)
		MyTH4	1031..1239	CDD:470587
		FERM1_F1_Myosin-VII	1243..1334	CDD:340612
		B41	1248..1429	CDD:214604
		PH-like	1454..1547	CDD:473070
		MyTH4	1674..1819	CDD:214535
		FERM2_F1_Myosin-VII	1825..1919	CDD:340613
		B41	1827..2032	CDD:214604
		FERM_C2_MyoVII	2028..2121	CDD:270020
VIIIA	NP_175453.2	MYSc_Myo8	171..817	CDD:276834	282/667 (42%)
		MAD	848..>1029	CDD:461677	44/197 (22%)