DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo28B1 and MYA2

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_001190465.1 Gene:MYA2 / 834412 AraportID:AT5G43900 Length:1565 Species:Arabidopsis thaliana


Alignment Length:1551 Identity:459/1551 - (29%)
Similarity:673/1551 - (43%) Gaps:415/1551 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAGYSPRKGEYVWVKPQNTTSEFAVPFGARIVRTEKTQTLVCDDRNKQFWVPA------GDVLK 59
            |.|.::|..|.:|||:..:                             :.|:..      ||.:|
plant    61 MVANFNPSVGSFVWVEDPD-----------------------------EAWIDGEVVQVNGDEIK 96

  Fly    60 AM-----HITSQ------EDVE-------DMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVA 106
            .:     |:.::      :|||       ||..|..|.|..:|:||.:||....|||||||:|:|
plant    97 VLCTSGKHVVTKISNAYPKDVEAPASGVDDMTRLAYLHEPGVLQNLHSRYDINEIYTYTGSILIA 161

  Fly   107 INPYQILP-IYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTEST 170
            :||::.|| :|::..:..|:..||.||.||.||::|.|::::.....:|.:::||||||||||||
plant   162 VNPFRRLPHLYSSHMMAQYKGASLGELSPHPFAVADAAYRQMINDGVSQSILVSGESGAGKTEST 226

  Fly   171 KLILQYLAAISGKHS----WIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQG 231
            ||:::|||.:.|:.:    .:||:::|:||::|||||||||||:|||||||::||:|..:|.|.|
plant   227 KLLMRYLAYMGGRAAAEGRSVEQKVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDEKGRISG 291

  Fly   232 ARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGR 296
            |.|:.||||:||:...|..|||||.|| ||......:.::.||:|  |.:||||.|..|..|...
plant   292 AAIRTYLLERSRVCQVSDPERNYHCFY-MLCAAPQEDVKKFKLEE--PKKYHYLNQSKCLELDSI 353

  Fly   297 GDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDT-P------ 354
            .||:::...|.||.|:....||..:|.|::|||||:||:.|...|       |||.: |      
plant   354 NDAEEYHATRRAMDVVGISTEEQDAIFSVVAAILHIGNIEFAKGE-------EIDSSIPKDDKSL 411

  Fly   355 -NLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRI 418
             :|:..|:||.....||..:|.:|.:....|.:|.:|..|||...|||..|.:|..:|..:|.:|
plant   412 FHLKTAAELLSCDEKALEDSLCKRIMVTRDETITKTLDPEAATLSRDALAKVMYSRLFDWLVDKI 476

  Fly   419 NETINKQVDQPMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHIN 483
            |.:|.:..|... .||||||:|||:|..|||||.|||..||.|||.|..|:|||||:||:.|.||
plant   477 NSSIGQDHDSKY-LIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYKKEEIN 540

  Fly   484 WQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSL 548
            |.:|||.|||.|||||..||..:::|:||...||:.|.:|..:||:........:.|.|..::. 
plant   541 WSYIEFVDNQDILDLIEKKPGGIIALLDEACMFPRSTHETFAQKLYQTFKTHKRFTKPKLARSD- 604

  Fly   549 FGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDTAKKQ---PTLCV 610
            |.|.||||.|.|....||:||:|....:.:.|:..|:..::..:||   ||....||   .::..
plant   605 FTICHYAGDVTYQTELFLDKNKDYVIAEHQALLNSSSCSFVASLFP---PMSDDSKQSKFSSIGT 666

  Fly   611 KFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHA 675
            :|:..|..|:..|:...|::|||||||...:|..|:.|..::|||..|:||..||..||||.|..
plant   667 RFKQQLVSLLEILNTTEPHYIRCIKPNNLLKPGIFENENILQQLRCGGVMEAIRISCAGYPTRKH 731

  Fly   676 YRAFVERYRLLVPPVGPLEQCD---CRKLARQICEVALPADSDRQYGKTKLFLRDEDDASLELQR 737
            :..|:.|:.:|.|.|......|   |:||   :.:|.|   ...|.||||:|||....|.|:.:|
plant   732 FDEFLARFGILAPEVLVKNSDDPAACKKL---LDKVGL---EGYQIGKTKVFLRAGQMADLDTRR 790

  Fly   738 SQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQ 802
            ::::.:|...|||.:|..|.::.....|.:...:|...||.|.|..|:.||    |..|.:..|:
plant   791 TEVLGRSASIIQRKVRSYLAKKSFIVLRNSAKQIQSVCRGYLARSVYEGMR----REAAALKIQR 851

  Fly   803 LTTKF------TMVRCRTIKLQALSRGYLVRKD--FQKK-------------LLERRKQNQLKKE 846
            ...:|      |.:....:.:||..||.:.||:  |:::             .|.|....:|||.
plant   852 DLRRFLARKAYTELYSAAVSVQAGMRGMVARKELCFRRQTKAAIIIQTWCRGYLARLHYRKLKKA 916

  Fly   847 ---------------ELLKLAKM----------------KEAEELL-RLQ-------QLKEQKER 872
                           ||.|| ||                |:.|||. |||       .|:|.|::
plant   917 AITTQCAWRSKVARGELRKL-KMAARETGALQAAKNKLEKQVEELTWRLQLEKRIRTDLEEAKKQ 980

  Fly   873 EQREQQ----------------------------------------------------------- 878
            |..:.|                                                           
plant   981 ESAKAQSSLEELQLKCKETEALLIKEREAAKKIAETAPIIKEIPVVDQELMDKITNENEKLKSMV 1045

  Fly   879 ----------EKRLQE---------EQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQ- 923
                      ||:|||         .|.|:||:   ..:.:....|:...|.:..||.|....| 
plant  1046 SSLEMKIGETEKKLQETTKISQDRLNQALEAES---KLVKLKTAMQRLEEKILDMEAEKKIMHQQ 1107

  Fly   924 -----ARNSLPPPPTTLIVAAPLPTRPASAVTRIN--------TIPESPGTIDVESSK------- 968
                 .|.:|..|||     ||:........|.:.        |.|     :|.::.|       
plant  1108 TISTPVRTNLGHPPT-----APVKNLENGHQTNLEKEFNEAEFTTP-----VDGKAGKSAAERQI 1162

  Fly   969 -------QMVDDVFRFLNDEPDAAL-------------RKLNNISSGDTIRLPKSVPNNIDTSDF 1013
                   ..|.|...|.|.:|.||.             .:..|:.......:..::.|..|.|..
plant  1163 MNVDALIDCVKDNIGFSNGKPVAAFTIYKCLLHWKCFESEKTNVFDRLIQMIGSAIENEDDNSHL 1227

  Fly  1014 SY-----------LKYAATYFGGGATAQHERKPLKKSLLK------HEHPID---EMASKAIWLT 1058
            :|           |:.:....|.||| |.::.|...||..      ...|..   ..|::|..|.
plant  1228 AYWLTSTSALLFLLQKSLKTNGSGAT-QSKKPPASTSLFGRMAMSFRSSPASGNLAAAAEAAALA 1291

  Fly  1059 ILRFMGDLPDVVSSPTL-----------HVFD--NENLMSDLASLLNTSDSYKPRLFVRQSQRRI 1110
            ::|     |.....|.|           .:|.  .:||..:|::||:        |.::..:...
plant  1292 VVR-----PVEAKYPALLFKQQLAAYVEKMFGMVRDNLKRELSTLLS--------LCIQAPRSSK 1343

  Fly  1111 PKPLASGEKEAQEF-YQHW------LN----------VPTSHLEKIHFIIGHGIIKNSLRDEILA 1158
            ...|.||....::. ..||      ||          ||...::||:         :.....|..
plant  1344 GGMLRSGRSFGKDSPAVHWQSIIDGLNSLLVTLKENHVPLVLIQKIY---------SQTFSYINV 1399

  Fly  1159 QICKQLYLNPSRSSYSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQLQATPSLQRLERTLVN 1223
            |:...|.|.....::|.|                      .|:|.|.|:|:..            
plant  1400 QLFNSLLLRKECCTFSNG----------------------EFVKSGLAELELW------------ 1430

  Fly  1224 GPRCQP-----PSLFELHAIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVNQLC 1274
              .||.     ||..||..||..... |.||    |:.|:..|      |..|.||
plant  1431 --CCQAKEYSGPSWEELKHIRQAVGF-LVIH----QKYRISYD------EIANDLC 1473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 294/706 (42%)
MYSc_Myo7 81..726 CDD:276832 281/663 (42%)
IQ 765..785 CDD:197470 6/19 (32%)
DUF4355 827..>887 CDD:290964 31/191 (16%)
MyTH4 1031..1239 CDD:295320 46/251 (18%)
B41 1248..1429 CDD:214604 9/27 (33%)
FERM_N 1248..>1288 CDD:286467 9/27 (33%)
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
MYA2NP_001190465.1 Myosin_N 73..108 CDD:280832 8/63 (13%)
MYSc 117..790 CDD:214580 292/693 (42%)
MYSc_Myo11 136..779 CDD:276835 281/663 (42%)
IQ 889..911 CDD:197470 2/21 (10%)
RILP-like 964..1083 CDD:304877 16/121 (13%)
MyosinXI_CBD 1159..1535 CDD:271259 76/385 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 530 1.000 Domainoid score I63
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8405
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.810

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