DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and PLEKHH3

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_016880602.1 Gene:PLEKHH3 / 79990 HGNCID:26105 Length:882 Species:Homo sapiens


Alignment Length:608 Identity:130/608 - (21%)
Similarity:224/608 - (36%) Gaps:116/608 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1600 GQWGQFLAG---NVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFR 1661
            |.|...::|   :||:.:.....:|:....|||....:.|..||            :||.....:
Human   253 GLWSVTVSGRKHSVRLCSPRQAEAERWGVALREVIASKAPLETP------------TQLLLRDIQ 305

  Fly  1662 EPLDSDKA--------PLSKFSPEPLKAPLLKAV--VKVP-----PLFQQALVMHHHILKYMGDI 1711
            |.....:|        |:.:.:...|.||||...  |..|     ||.::|:.:...:....|  
Human   306 ESCGDPEAVALIYLRNPILRHTSGALYAPLLPLPYGVSAPGPGYAPLREEAVRLFLALQALEG-- 368

  Fly  1712 ARSNLPVNTDLIFQPALQHPLLCDELYCQLMKQLSDN------PSSE--SEKRGWDLLYLATGLV 1768
            ||...|:... :.|.....|.|.|||:.||.||.|..      |:::  :..|.|.||...:...
Human   369 ARRPGPLMQG-VLQTCRDLPALRDELFLQLAKQTSGPAGPPGLPATQDPAALRYWQLLTCMSCTF 432

  Fly  1769 APSVLVMRELIILLRMRADALADACLKRLKRSL--AQGQ---RKKAPHLIEVEGIQQRCLHIYHK 1828
            .|...|...|:..|.....||.|:.|....|.:  |.|:   |:..|.|.|:..:.|| ..:...
Human   433 RPGGAVRGHLLGHLERTEQALPDSELAEYARFIRKALGRTRGRELVPSLAEISALSQR-QELLCT 496

  Fly  1829 IYFPDDTVEAFEIESHTRGAELIADIAQRLEL-KSPVGYSIFLKTGDRVYAMPEEEFVFDFITQL 1892
            ::.|.....|..|:|||...|:..::..||.| :|...::::.:.|.:..|:.....|.|.:|:.
Human   497 VHCPGAGACAVAIDSHTTAGEVARELVGRLGLARSRNAFALYEQRGAQERALAGGTLVADVLTRF 561

  Fly  1893 IYWLRQQRTIRSISDGQYQLHFMRKLWLNNHPGEDLNGD---MIFSYPQELHKYLKGYYPIDCEQ 1954
            .....::..:....|..::|  ..:|....|| |.|:.|   :.|.:.|.....|:|..|...:.
Human   562 ENLAAEEAGLEDSPDSGWRL--CLRLHGPLHP-EGLSPDGHELPFLFEQAHALLLRGRPPPPDDT 623

  Fly  1955 ASRLAIL-VYSADHDVSLQRLP-EVLTRLIPEDLIP----------------LQTVAEWRQQILP 2001
            ...||.| :.|...|.| .|:| ..|.||:|....|                |...|.|...:..
Human   624 LRALAALRLQSLQRDFS-PRVPLPRLDRLLPPPAPPREDPPRPTPRPPPSAALLAGALWSPGLAK 687

  Fly  2002 K----------------VHRD-------------------HLTEDHAKILFLQELSHFACFGSTF 2031
            :                :.|:                   .:....|...:|...:....||:..
Human   688 RRAERARRGGAGRTAGSIAREGGGGAGTAAAVLGGWKRLRGMGRAEAMAAYLALAAQCPGFGAAR 752

  Fly  2032 FVVKQQNDD---ALPETLLIAINSTGFHMLDPTTKEILRSYEYSQLGIWS-SGKNHFHIRFGNMI 2092
            :.|.:.:.:   ..|:.|.:.:.:....:..|...|.:.|..|..:.... .|.:...:|    :
Human   753 YDVLELSTEPGRGAPQKLCLGLGAKAMSLSRPGETEPIHSVSYGHVAACQLMGPHTLALR----V 813

  Fly  2093 GASKLLCSTTQGYKMDDLLASYV 2115
            |.|:||..:.|..::..|:.:|:
Human   814 GESQLLLQSPQVEEIMQLVNAYL 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580
MYSc_Myo7 81..726 CDD:276832
IQ 765..785 CDD:197470
DUF4355 827..>887 CDD:290964
MyTH4 1031..1239 CDD:295320
B41 1248..1429 CDD:214604
FERM_N 1248..>1288 CDD:286467
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535 45/164 (27%)
B41 1827..2032 CDD:214604 50/261 (19%)
FERM_N 1829..>1877 CDD:286467 12/48 (25%)
FERM_M 1936..2032 CDD:278785 25/148 (17%)
FERM_C2_MyoVII 2028..2121 CDD:270020 17/92 (18%)
PLEKHH3XP_016880602.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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