DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and myo15b

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_017214038.2 Gene:myo15b / 795537 ZFINID:ZDB-GENE-030131-4797 Length:1899 Species:Danio rerio


Alignment Length:2144 Identity:392/2144 - (18%)
Similarity:644/2144 - (30%) Gaps:887/2144 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   565 FLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDTAKKQ-----------PTLCVKFRNSLDM 618
            ||.||.|.|..::..|..||..:.:..:|.........:|:           .|:...|:.||..
Zfish    12 FLNKNHDQFRPEVLELFARSRLQMVSGLFRKVQERYIQQKELGRARGHRNQMSTVAANFQQSLTE 76

  Fly   619 LMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERY 683
            |...|.:....|:||.|||..|.|..||.:....|||:.|::||..||:.|:|||..:..|:|||
Zfish    77 LTTRLERCKTTFVRCFKPNYVKLPGIFDVDYITTQLRHGGILETIHIRKEGFPIRIPFAQFMERY 141

  Fly   684 RLLVPPVGPLEQCDCRKLARQI---CEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSI 745
            .:|:.. .|:.|    .|..|:   .|.....|...|.|.||:||::.....:|.:.|.....:.
Zfish   142 GVLLSQ-RPINQ----SLEEQVVTLIETIGAEDGQYQLGLTKVFLKETLYQQVEEKWSSTQTWAA 201

  Fly   746 VTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKF--T 808
            |||||.||..:.||..:.:::..|.:|.:.||. |.|||      |.:|..|.      |:|  |
Zfish   202 VTIQRNIRGFICRRNFQFFKKKAIVIQSHIRGH-QARKY------FKQLKQCF------TQFWAT 253

  Fly   809 MVRCRTIKLQALSRGYLVRKDFQKKLLERRKQNQLKKEELLKLAKMKEAEELLRLQQLKEQKERE 873
            |:..|                           |.:|:..      .||..:..|::::  .|...
Zfish   254 MMITR---------------------------NTIKRRH------WKEHTDRSRVKEV--AKPTS 283

  Fly   874 QREQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVA 938
            ...:.:..:.|   :.||.:||    :.:...:.:...|.:.||  |.::|.:.|          
Zfish   284 SSSEMDVGILE---IPAELSAR----LRSSSGRSQGSGVSEVAP--PQVKADHKL---------- 329

  Fly   939 APLPTRPASAVTRINTIPESPGTIDVESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKS 1003
                                                                            |
Zfish   330 ----------------------------------------------------------------S 330

  Fly  1004 VPNNIDTSDFSYLKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPD 1068
            :|.:||...||  :||.|....| ..|.:..||::.|...:|. |...:..|:..||||.||   
Zfish   331 LPLDIDRHPFS--QYANTVLKDG-WCQAQGYPLQRPLTSLDHE-DARTALEIYKLILRFTGD--- 388

  Fly  1069 VVSSPTLHVFDNENLMSDLASLLNTSDSYKPRLFVRQSQRRIPKPLASGEKEAQEFYQHWLNVPT 1133
                            |||                            :|.:|.            
Zfish   389 ----------------SDL----------------------------NGWQEQ------------ 397

  Fly  1134 SHLEKIHFIIGHGIIKNS-----LRDEILAQICKQLYLNPSRSSYSRGWLLLSLCLSCFPPSKEF 1193
                    ::|:.|::.|     :|||||||:....:....:.:..||||||:.|||.|.||.:.
Zfish   398 --------MLGNYIVEKSQIRPGIRDEILAQLVYLTWDGDRQETNLRGWLLLACCLSAFTPSPDL 454

  Fly  1194 E-PHLRSFMKQGTAQLQATPSLQRLERTLVNGPRCQ--PPSLFELHAIRGRHPLRLDIHLMDGQQ 1255
            | |.|:....:|..:.::....:.|....:..|.|:  ||:..|..|.:.:..:.|:::..:.::
Zfish   455 EKPLLKYVSDRGPGEYRSLCQHKLLTSLPLPSPACRRHPPTQLEWTANQRKGKMVLEVNTFNEEK 519

  Fly  1256 RRLQVDAASTAREAVNQLCQGMGL-----------------TDTFGFGLVMSL------------ 1291
            ..::|::.:|..|..:.:....||                 ||..|...||.|            
Zfish   520 LAVEVESWTTGEELASWILSYRGLTNATQGWSVSLLADEGWTDLTGCDFVMDLLAGVESDVPMGH 584

  Fly  1292 ----------------------------------------------------------------- 1291
                                                                             
Zfish   585 PPTENDYLFSDTSDRMETTDIDAFIPPAPSMQAPGLPSFEASHWNTYEPLSTYQGSQGRQMDSYV 649

  Fly  1292 ---------------------------NGKLMP---LGAG------------------------- 1301
                                       .|.:||   .|||                         
Zfish   650 DDIFDPVFDHGPPDFDRMAMLNRRMRGGGGMMPSMYTGAGMPMNPAMAGYGATPMMPNMMPATMP 714

  Fly  1302 -----------------------------------------QEHVLDAISECEQRQLD------- 1318
                                                     |:..:.|:|..:::|.|       
Zfish   715 MMQPMPPMMMPTAMPQAMPAVNPQQMDQQQAFINQQALLLAQQMTMQAMSLSQKQQQDEMRRRES 779

  Fly  1319 ----------------------------------------------------------------- 1318
                                                                             
Zfish   780 QRQSPRQRRRSPPRARSPSRSPSPKPRSRPQSQRTNHQTPKQAPEPLPKPRSPEPVTERDVRAPE 844

  Fly  1319 ---------------------------------------------APWKLYIR------------ 1326
                                                         .|.|..::            
Zfish   845 DHGSFKEKRDFFQKIGTSDTRPKPAPKVAKPLIYANPPVSQPKSPPPVKTQVKPLPEPPQIQKSG 909

  Fly  1327 -----------------KEMFATWYD-PSMDPKATQLI---YKQILNGLKCGEYRCRSEKDIAMV 1370
                             :|:...:.: |:.:|||.:.:   .||.|        :....||.   
Zfish   910 RESPEPTSPKPEPTSNIREIIKQYQNRPNPEPKAYEPVRVPAKQFL--------KKNDPKDE--- 963

  Fly  1371 CALACFVEYGPGEILRLKPSEITAFVPSDLLAPGERAIEN------------------------- 1410
             |||.....||....:.:..|.....|..|.:.|.|:|.|                         
Zfish   964 -ALAILKSQGPVSHQKKQWVEKPPSPPQQLESRGPRSISNSMKQKQLSLADLFGSQRSQPLPRAR 1027

  Fly  1411 ---------------------------------------WSRLIAATY----------EKSSYVK 1426
                                                   :|..:..:|          ::..|.:
Zfish  1028 ESIPSPPPPIPDPPRQPAPALNQLNMMAEEESVRSQLHKFSASVYFSYPIMPGKLFLRKELFYPR 1092

  Fly  1427 EEQN-----DLLLE----------------AQKRAKEDICLFAHL-------------------- 1450
            |:.|     :||.|                .::|..:|:....|:                    
Zfish  1093 EKFNHPYTLNLLCEQIMRDTYSDSCLRISREERRKMKDLLASFHIGTNIRSLDDAMKKRIVMAAR 1157

  Fly  1451 -SWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLFLIDETE---------QVLASCCFSEVLKV 1505
             :|....:|||.|....|    .|..|||::..|:.|:....         :||.:..:|:||.|
Zfish  1158 DNWSNYFARLFNVKVGNG----GDAQMLGVSHRGIRLLKVARASGINPKHLKVLHTFSYSQVLSV 1218

  Fly  1506 HVESDDKLHVMTFQHVNFVLQCSSAQDANEVINYMLDNLRQRSSYGVALDPVVEGDLEDCLVLNP 1570
            ..:...|: |:|..:....|....|.....||...|..|.:.|.|.:|:...|..| :..|..:.
Zfish  1219 QQKGTGKV-VITLSNEELELHSQQAPQIAAVIRLFLMELIKNSEYVIAVKSYVTDD-KSLLSFHR 1281

  Fly  1571 GDLIE----------------------FEAGVT---------------------------GAQLM 1586
            ||.|:                      |...||                           .::::
Zfish  1282 GDAIKLLNMDGLKDGWMFGSSGGRSGLFPVDVTQPCAPPDYHSSNMDRQLERKKSMRVTSSSRIV 1346

  Fly  1587 AGNAQDCYRGCVNGQWGQFLAGNVRVLATLTKPSEKLQDILRE---GRFQEPPKPTPRANYSRRR 1648
            ..|      |.:|.     :..||..:.|.|..|.....:.|.   |........:.:.:...|.
Zfish  1347 PSN------GSINN-----MPANVAEINTSTNGSIYNMSVARSVAGGSEYSVEVASIQRSEPERE 1400

  Fly  1649 QHNISQLAESHFREPLDSDKA----PLSKFSPEPLKAPL-LKAVVKVPPLFQQALVMHHHILKYM 1708
            |..:::.|...|.|.::....    .:.:::|.|::..| |.:..::..|..|:.::   ::::|
Zfish  1401 QFIMTEFASKFFTEAINRGNMRSLNEMVEYTPNPIQESLILFSDSELTRLGAQSFMV---VMQFM 1462

  Fly  1709 GDIARSNLPVNTD---LIFQPALQHPLLCDELYCQLMKQLSDNPSSESEKRGWDLLYLATGLVAP 1770
            .|..........|   .|.|...:...|.||||||::||.:.:...|:..|||.|..|.||....
Zfish  1463 LDQPMKKNQTEGDCVNFILQLGKEKEFLRDELYCQVIKQTTKHRIKENCTRGWRLFNLVTGFFPC 1527

  Fly  1771 SVLVM----RELIILLRMRADA------LADACLKRLKRSLAQGQRKKAPHLIEVEGI----QQR 1821
            |..::    |.|..:::   ||      ||:.|.|.|:|||..|.|:..|...|:|.|    ..|
Zfish  1528 SNTLLPYCTRHLDTIIQ---DANHPYQELANICAKNLQRSLIFGGRRHIPSHSEMEAILAGRNSR 1589

  Fly  1822 CLHIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLELKSPVGYSIF-----LKTGDRVYAMPE 1881
            .|    .|..|..|..|.:|.|.:...|::.|....:.:.:|.....|     .|.||....:..
Zfish  1590 RL----PIMLPGGTEFACKIRSFSVAFEVVQDFCTEMGIMNPAEMKEFSIHAAKKGGDVTRPIHS 1650

  Fly  1882 EEFVFDFITQLIYWLRQQRTIRSISDGQYQLHFMRKLWLNNHP---GEDLNGDMIFSYPQELHKY 1943
            :|::|||:               :.||...|.|.|.:|  ..|   ..||.  :.|.|...:..|
Zfish  1651 DEYLFDFL---------------LDDGSIALSFKRLIW--KQPLQFSNDLY--LEFHYQLLVASY 1696

  Fly  1944 LKGYYPIDC------EQASRLAILVYSADHDVSLQRLP---EV------LTRLIPEDLIPLQTVA 1993
            |:|...:..      :|.:.|..|.:.|   :.|..||   |:      :..|...|...|.|:.
Zfish  1697 LEGKMFLSMNSSTVYQQVAELTALQHLA---LGLNNLPSNAEIKQYHPRMDGLNSTDERLLATIR 1758

  Fly  1994 EWRQQILPKVHRDHLTEDHAKILFLQELSHFACFGSTFFVVKQQNDDALPETLLIAINSTGFHML 2058
            .....:.|      ::...||..|::.:|....||...|..::.:..:.|...|:|:|.....:|
Zfish  1759 AQFSTLGP------ISPLDAKARFIKSISSLPLFGFDIFTAQKVSHRSCPSPSLVAVNHEVITVL 1817

  Fly  2059 DPTT---------------------KEILRSYEYSQLGIWSSGKNHFHIRFGNMIGASKLLCST 2101
            ||.|                     |:.|.|.|.|    :.....|..:.|.  :..:|.||.|
Zfish  1818 DPKTLNACLTMSMEDVLSLRSIRPKKDKLPSVEIS----FGGQTQHKTLSFN--LKQAKELCHT 1875

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 57/185 (31%)
MYSc_Myo7 81..726 CDD:276832 55/174 (32%)
IQ 765..785 CDD:197470 7/19 (37%)
DUF4355 827..>887 CDD:290964 7/59 (12%)
MyTH4 1031..1239 CDD:295320 50/215 (23%)
B41 1248..1429 CDD:214604 50/594 (8%)
FERM_N 1248..>1288 CDD:286467 8/56 (14%)
FERM_B-lobe 1342..1429 CDD:271216 22/163 (13%)
PH-like 1454..1547 CDD:302622 26/101 (26%)
MyTH4 1674..1819 CDD:214535 47/162 (29%)
B41 1827..2032 CDD:214604 50/227 (22%)
FERM_N 1829..>1877 CDD:286467 13/52 (25%)
FERM_M 1936..2032 CDD:278785 23/110 (21%)
FERM_C2_MyoVII 2028..2121 CDD:270020 21/95 (22%)
myo15bXP_017214038.2 Motor_domain <5..182 CDD:328930 55/174 (32%)
IQ 221..241 CDD:279006 8/26 (31%)
MyTH4 359..503 CDD:321946 50/211 (24%)
GGN <812..>962 CDD:330621 10/157 (6%)
SH3 1262..1316 CDD:327375 11/54 (20%)
MyTH4 1476..1581 CDD:307090 36/107 (34%)
FERM_B-lobe 1590..1791 CDD:324381 51/232 (22%)
FERM_C_MyoXV 1787..1887 CDD:270022 21/95 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.710

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