DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Myo19

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_079690.2 Gene:Myo19 / 66196 MGIID:1913446 Length:963 Species:Mus musculus


Alignment Length:1014 Identity:308/1014 - (30%)
Similarity:477/1014 - (47%) Gaps:199/1014 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 DVEDMITL-GDLQEY----------------------TILRNLQNRYAKQLIYTYTGSMLVAINP 109
            |.|...:| |||:|:                      |:||.||.||.:.:.||..|..|||:||
Mouse    13 DAEGRASLKGDLREFLGGEIPLHQLDDLTKVNPVTLETVLRCLQARYTEDIFYTNAGCTLVALNP 77

  Fly   110 YQILPIYTNREIQLYRNKSLAE---------LPPHIFAISDNAFQRLQRLKE--NQCVVISGESG 163
            ::.:|       |||..:.:.|         |.||||.:.:..::.::.|.|  ||.:|:|||||
Mouse    78 FKHVP-------QLYAPELMQEYHAAPQPQKLKPHIFTVGEQTYRNVKSLIEPVNQSIVVSGESG 135

  Fly   164 AGKTESTKLILQYLAAISGKHS---------WIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYI 219
            ||||.:::.::::.|.::...:         .|||:|:.:||:|||||||.|:||.|||||||:|
Mouse   136 AGKTWTSRCLMKFYAVVAASPTSCENHKIAERIEQRILNSNPVMEAFGNACTLRNSNSSRFGKFI 200

  Fly   220 EIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHY 284
            :::......:.||.:|.|||||:|:..|:..|||:||||.:..|.:..||          .|:| 
Mouse   201 QLQLNRAQQMTGAAVQTYLLEKTRVACQASSERNFHIFYQICKGATKDER----------LQWH- 254

  Fly   285 LAQGGCFT-LPGRGDAKD---FADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANL 345
            |.:|..|: ||....:.:   |...|.||..|........:|..:||.:|||||:.|..:|...|
Mouse   255 LPEGTAFSWLPNPESSLEEDCFEVTREAMLHLGIDTPTQNNIFKVLAGLLHLGNVHFVDSEDEAL 319

  Fly   346 ATAEIDDTP-NLQRVAQLLGIPISALNAALTQRTIFVHGEH--VTTSLSKEAAIEGRDAFVKSLY 407
            ....:|||. :::..|.||.:|...|..::..|||....:.  .....|:......||...|.:|
Mouse   320 PCQVMDDTKVSVRTSALLLQLPEKMLLESMQIRTIKAGKQQQVFQKPCSRAECDTRRDCLAKLIY 384

  Fly   408 DGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKM 472
            ..:|..:|..||.:|..........||:||::|||:|.|||.||||||||||.|||.||.|..:.
Mouse   385 ARLFDWLVSVINSSICADSKSWTAFIGLLDVYGFESFPNNSLEQLCINYANEKLQQHFVAHYLRA 449

  Fly   473 EQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLE-KLHVQHGNRS 536
            :|:||:.|.:.|..:.:||||..|||:...|:::.|||:||.:..:.:....|: ::......|.
Mouse   450 QQEEYEVEGLEWSFVNYQDNQTCLDLLEGSPISICSLINEECRLNRPSSAAQLQTRIESTLAGRP 514

  Fly   537 IYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDT 601
            .....|.::...|.:.|:||.|.|:..|.:|||:|....:|..|:|:|.:..|..:||......|
Mouse   515 CLGHNKLSREPSFVVVHFAGPVRYHTAGLVEKNKDPVPPELTELLQQSQDPLLTMLFPANPEEKT 579

  Fly   602 AK------KQPTLCV--KFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSG 658
            .:      :.|.|.|  ||:.||:.|::.|....|::|||||||...:|:.|.:|..:.||...|
Mouse   580 QEELSGQSRAPALTVVSKFKASLEQLLQVLHNTTPHYIRCIKPNSQSQPQTFLQEEVLNQLEACG 644

  Fly   659 MMETARIRRAGYPIRHAYRAFVERYRL--------------LVPPVGPLEQCDCRK--------- 700
            ::||..|..||:|||.:::.|:|||:|              |.|..|..||..|.|         
Mouse   645 LVETIHISAAGFPIRVSHQNFIERYKLLRRLGPRMSSGLGGLEPAEGSSEQPLCAKEATLQPLLQ 709

  Fly   701 -----LARQICEVALPADSDRQ------YGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRR 754
                 |...|...|.|:|..:.      .|:||:|:.|.....||..|:|::.:....||.|.||
Mouse   710 DILHALPALIQTAATPSDPAKNTQIPLYCGRTKIFMTDSMLELLECGRAQMLEQCARCIQCGWRR 774

  Fly   755 VLFRRYMKRYREAIITVQRYWRGRLQRRKYQ-------VMRQGFHRLG---ACIAAQQL------ 803
            ...::..|:.|.|:: :|..:|..|.|:..:       |::..:|:..   ||:|:::|      
Mouse   775 HRLQKQEKQRRAAVL-IQAAFRSWLTRKHIRRLHIAATVIKHAWHKWRIRMACLASKELDGMEEK 838

  Fly   804 -------TTKFTMVRCRTIKLQALSR----GYLVR------KDFQKKLLERRKQNQLKKEELLKL 851
                   |.:.:|....|..|.|:..    |.::.      :.||:||:                
Mouse   839 PMPQAPGTLRSSMSPAHTRFLGAIIHLWPLGLVLANSADGVRGFQRKLV---------------- 887

  Fly   852 AKMKEAEELLRLQQLKEQKEREQREQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEA 916
                 |...|||..          ::...::|..|:.:|...:..||...:::...|..|     
Mouse   888 -----AHACLRLPS----------DRPSNKVQTPQQDQAGITSIRALPQGSIKFHCRKSP----- 932

  Fly   917 PKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTI 955
                 ||..:..|.|             .||.||..|.|
Mouse   933 -----LQYADICPDP-------------SASCVTGFNQI 953

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 247/736 (34%)
IQ 765..785 CDD:197470 6/19 (32%)
Atrophin-1 <820..>946 CDD:460830 20/135 (15%)
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo19NP_079690.2 MYSc_Myo19 49..746 CDD:276846 247/714 (35%)
Actin-binding. /evidence=ECO:0000255|PROSITE-ProRule:PRU00782 602..624 10/21 (48%)
IQCD 776..>801 CDD:467745 6/25 (24%)
MyMOMA region. /evidence=ECO:0000250|UniProtKB:Q96H55 829..963 32/179 (18%)
Blue background indicates that the domain is not in the aligned region.

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