DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and myo10

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_005171458.1 Gene:myo10 / 569779 ZFINID:ZDB-GENE-070912-277 Length:2069 Species:Danio rerio


Alignment Length:2318 Identity:590/2318 - (25%)
Similarity:962/2318 - (41%) Gaps:589/2318 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 MHITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILP-IYTNREIQLY 124
            ||.:|...||||..|.||.:..||.||..||.::.||||.||:|||:|||:.|. :|....::.|
Zfish    57 MHSSSITSVEDMAALQDLHDGAILHNLHLRYTQKAIYTYIGSILVAVNPYESLSGLYDGAAVERY 121

  Fly   125 RNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGK------ 183
            ....|.|:||||:||::..::.|.:...||||:||||||||||||||:||::|:|:|.:      
Zfish   122 SRHHLGEIPPHIYAIANECYRSLWKRSNNQCVLISGESGAGKTESTKMILRFLSAMSQQSAALST 186

  Fly   184 ----HSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRI 244
                .|.:|:.|:|::||||||||||||.|:|||||||:|::.|:..|.|||.||..|||||:|:
Zfish   187 SKTASSHVEEAILESSPIMEAFGNAKTVHNNNSSRFGKFIQLHFSQHGNIQGGRITDYLLEKNRV 251

  Fly   245 VFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAM 309
            |.|:..||||||||.:|||.|..::|...|  .:|..:|||.|.||.......|.:.|.::..|:
Zfish   252 VRQNPGERNYHIFYALLAGTSAEQKESFSL--SAPEGFHYLGQSGCVKDKAINDTETFQEVLNAL 314

  Fly   310 KVLSFKPEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAAL 374
            :.:.|..|.:..:|.||:.|||:||:.|...     ..|::.....|.:.|.|||:..:.|...|
Zfish   315 RTMQFGEENIKEVLRLLSGILHVGNIEFLTA-----GGAQVCSKTALSKAADLLGLDCAQLAEVL 374

  Fly   375 TQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIF 439
            |.|::.:.||.::|.|:.|.|::.||:...:||...|..|:|::|..||...|  ..|||:||||
Zfish   375 THRSMILRGEEISTPLTVEQAVDSRDSMAMALYSQCFTWIIRKLNNRINGSED--FRSIGILDIF 437

  Fly   440 GFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPM 504
            |||||:.|.|||..||||||.||::|..|||.:||.||..|.:.|..:.:.||.:.|||| .|.:
Zfish   438 GFENFEVNRFEQFNINYANEKLQEYFNKHIFSLEQLEYNKEGLVWDDVNWMDNGECLDLI-EKKL 501

  Fly   505 NLMSLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKN 569
            .|::|::|||.||||||.|||||||.||.....|:|.:.. ...|||:||||.|:|:..|.||||
Zfish   502 GLLALVNEESHFPKGTDGTLLEKLHSQHSRNQFYIKPRVA-VHQFGIKHYAGEVVYDVRGILEKN 565

  Fly   570 RDSFSGDLRTLVQRSTNKYLVDIFPHE---MPMDTAK-----KQPTLCVKFRNSLDMLMRTLSQA 626
            ||:|..|:..|::.|...::.|:|...   ...||.|     ::||:..:|:|||..||.|||.:
Zfish   566 RDTFRDDVLNLLRESRLDFVYDLFERVNAWTGQDTVKCGSKYRRPTVSSQFKNSLHSLMSTLSTS 630

  Fly   627 HPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVG 691
            :|:|:||||||..|.|..|::.:.:.|||||||:||.:|||:|:|||..::.|..||.:|:..:.
Zfish   631 NPFFVRCIKPNISKMPGQFEQTVVLNQLRYSGMLETVKIRRSGFPIRRTFKDFCSRYYVLMRALA 695

  Fly   692 PLEQCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVL 756
            ..|....|.|.  :.::...:.::.|.||.|:|:|:..:..||.||...:||:...||..|....
Zfish   696 LSEDLKGRSLL--LLQLYDNSGAEWQLGKNKVFMRESLELRLEKQRETEVLKAASIIQAHILGYR 758

  Fly   757 FRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALS 821
            .||..:|....|:.:|:.:|....||::|.||..                       |:.||...
Zfish   759 ARRQYRRLLLCIVVIQKNYRALYWRRRFQTMRWA-----------------------TVTLQKRL 800

  Fly   822 RGYLVRKDFQKKLLERRKQNQLKKEELLKLAKMKEAEELLRLQQLKEQKEREQREQQEKRLQEEQ 886
            ||...|:.:...|.|:||                           :|::||..||:||...:|..
Zfish   801 RGQRARRLYVHLLEEKRK---------------------------REEEERRHREEQEALERERH 838

  Fly   887 R-LKAEAAARNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVT 950
            | |:.|..|:.|.....:::|.::|..:...|:..|..:           |.|...|.:      
Zfish   839 RLLELELLAQAAEEARRLEEKLKSKQTQVVFPETITPDS-----------ITAEDSPQK------ 886

  Fly   951 RINTIPESPGTIDVESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVPNNIDTSDFSY 1015
               :||......:...::|:.|:||       :|...:.:.:.  :.:||.:.:..         
Zfish   887 ---SIPHESPIEETSLAEQVSDEVF-------EAETNQASQVE--EILRLEREIEG--------- 930

  Fly  1016 LKYAATYFGGGATAQ--HERKPLKKSLLKHEHPIDEMASKAI--WLTILRFMGDLPDVVSSPTLH 1076
            |:..........|.|  |..:.|:...|:.   ::|.|.||.  :||.|.|     |.:      
Zfish   931 LRRQKEAQEQSLTTQSLHRLQRLRDQELRR---LEEEACKAAQQFLTSLNF-----DEI------ 981

  Fly  1077 VFDNENLMSDLASLLNTSDSYKPRLFVRQSQRRIPKPLASGEKEA--------QEFYQHWLNVPT 1133
                :..:.::.|.|..|..         ||:..|:    ||::.        ::.::...| |:
Zfish   982 ----DECVRNIESSLGGSGG---------SQQGSPR----GEEDEVDEGLGVDEDGFKDSPN-PS 1028

  Fly  1134 SHLEKIHFIIGH-------GIIKNSLRDE-------------ILAQICKQLYLNPSRSS------ 1172
            .|        ||       ||..:....|             :|..|...:|..|..||      
Zfish  1029 EH--------GHSDGQRTSGIRTSDDSSEEDPYANDRVALPPVLPLIMPSVYRAPPSSSGSTYSH 1085

  Fly  1173 ----------------------YSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQLQATPSLQ 1215
                                  |..|.|::.      |||  ..||...:.::..:.|..:.|:.
Zfish  1086 AVLEEETELIPPDEDSDYDADDYDEGGLIMR------PPS--LPPHNDIWSRENRSSLATSASVS 1142

  Fly  1216 R-LERTLVNGPRCQPPSLFELHAIRGRHPLRLDIHLMDGQQ--RRLQVDAASTAREAVNQLCQGM 1277
            . ..|...:||:    |.||                 |.:.  .|...|..|:.|......|..:
Zfish  1143 SGAYRFSSDGPQ----SSFE-----------------DSEDDFDRFDTDDESSYRRDSVYSCVTL 1186

  Fly  1278 GLTDTFGF---GLVMS-----------------------LNGKLMPLGAGQEHVLDAISECEQRQ 1316
            ....:|.:   ||:.|                       ..|.||..|.|.       |...:|.
Zfish  1187 PYFHSFLYIKGGLLNSWKRRWCVLKDETFLWFRSRQEALKQGWLMKKGGGS-------STLSRRN 1244

  Fly  1317 LDAPWKLYIRKEMFATWYDPSMDPKATQLI----YKQIL------NGLKCGEYRCRSEKDIAMVC 1371
            ....|  ::.::....:|:...:.:...::    .|:|:      ||:                 
Zfish  1245 WRRRW--FVLRQSKLIYYENDTEERMKGMLDMHEAKEIIDVTGKENGI----------------- 1290

  Fly  1372 ALACFVEYGPGEILRLKPSEITAFVPSDLLAPGERAIENWSRLIAATYEKSSYVKEEQNDLLLEA 1436
                                       |::.||..     ..|:|.|.|.||:.....:.:.:..
Zfish  1291 ---------------------------DIVMPGRT-----YHLVAETAEDSSHWFSVLSQVHMST 1323

  Fly  1437 QKRAKEDICLFAHLSWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLFLIDETEQVLASCCFSE 1501
            ::..:|                            ..||.....|:.|...:...:.|.||     
Zfish  1324 EQEIRE----------------------------MHDEQANPQNAVGTLDVGMIDSVCAS----- 1355

  Fly  1502 VLKVHVESDDKLHVMTFQHVNFVLQCSSAQDANEVINYMLDNLRQRSSYGVALDPVVEGDLEDCL 1566
                  ::.::.:.......:.||.| .|:.|.|:.:::  .|.||:..    |..|:|  ::.:
Zfish  1356 ------DNPERPNAFVIITAHRVLHC-MAESAEEMHHWI--TLLQRTKG----DTRVQG--QEFI 1405

  Fly  1567 VLNPGDLIEFEAGVTGAQL--------MAGNAQDCYRGCVNG--QWGQFLAGNVRVLATLTKPSE 1621
            :  .|.|.:...|.:.|.|        :..|:.|.|:.....  :.|..:..:   |.::..|.|
Zfish  1406 I--RGWLYKEIRGSSQANLKLKKRWFVLTHNSVDYYKSSERNALKLGSLVLNS---LCSVLVPDE 1465

  Fly  1622 KLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFREPLDS--DKAPLSKFSPEP------ 1678
            :   :.||..:........:.:|   |.::..|...|.:...:.:  |..||...:.:.      
Zfish  1466 R---VFRETGYWNVSVFGHKHSY---RLYSKLQTEASRWANAVQTVIDSKPLIDTNTQRLILDIK 1524

  Fly  1679 ---LKAPLLKAVVKVPPLFQQALVMHHHI------LKYMGDIARSN------------------- 1715
               |.:.:::.:.|..|:.:..   ||.:      |.| ||..:|:                   
Zfish  1525 ENCLNSEVVEQIYKRNPILRYT---HHPLHTALLPLPY-GDAQQSSDKGRSYGTLQAEALKLFNV 1585

  Fly  1716 -LPVNTDLIFQPALQ------HPL--LCDELYCQLMKQLSDN--PSSESEKRGWDLLYLATGLVA 1769
             ..:.|::...|.:|      |.|  |.|||:|||:||.|.:  |...:....|.::.......:
Zfish  1586 LHQLETEVSAIPHIQTLLQTTHDLRPLRDELFCQLIKQTSHHPKPGGPAHINSWRIIACLCCTFS 1650

  Fly  1770 P---SVLV--------MRELIILLRM-RADALADACLKRLKRSLAQGQRKKAPHLIEVEGIQQRC 1822
            |   |:|.        .|||.....| |..|.:...|:.::      .|:..|...|:..|..| 
Zfish  1651 PASRSILKYLKFHFKRTRELYPGTEMERYAAFSQDALRHVR------GREYVPSQEELRAILSR- 1708

  Fly  1823 LHIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLELKSPVG-YSIFLKTGDRVYAMPEEEFVF 1886
            ..:...:|..........|.|||...|::..:.:.|.::.... :::|....:...|:.....|.
Zfish  1709 QEMTATVYCHGGGSCKITINSHTTAGEVVEKLLKGLSMEDCRNMFALFEHNDNTDRAIESRTVVA 1773

  Fly  1887 DFITQLIYWLRQQRTIRSISDGQ-YQLHFMRKLWLNNHPGEDLNGDMI---FSYPQELHKYLKGY 1947
            |.:.:.      ::......||: ::.:|  ||:..:.| |::..|.:   |.:.|.....::|.
Zfish  1774 DILAKF------EKLANKEQDGESWKFYF--KLFCFSEP-ENVPADSVEFAFMFEQAHEAVIRGR 1829

  Fly  1948 YPIDCE-----QASRLAILV--YSA-------DHDVSLQRL------------------------ 1974
            ||...|     .|.||..|:  ||.       |....::||                        
Zfish  1830 YPAPEETLQFLAALRLQYLLGDYSTQSALPELDQVFPMERLRARVQQSARSFASATPSTDRKRSS 1894

  Fly  1975 ----------------------PEVLTRLIPEDLIPLQT--VAEWRQQILPKVHRDHLTEDHAKI 2015
                                  |..:...:.::...|::  |.:||:       ...:.:|.|..
Zfish  1895 FLEGTLRRSFRGTLGRQRQEEEPAAIEVWLQDEKAGLKSCLVEKWRK-------LQGMEQDQAMK 1952

  Fly  2016 LFLQELSHFACFGSTFFVVKQQNDDALPETLLIAINSTGFHM--------LDPTTKEILRSYEYS 2072
            .::..:..:..:|||.|.| :..|...|..|.:.::..|..:        |:....|::.|:...
Zfish  1953 KYMGLIKEWQGYGSTLFDV-ECVDGVYPGELWLGVSRKGVCVYKRGEPWPLEVFLYEVILSFGAP 2016

  Fly  2073 QLGIWSSGKNHFHIRFGNMIGASKLLCSTTQGYKMDDLLASYV 2115
            |..::...           :...:||.:|:....:..|:.:|:
Zfish  2017 QPNVYKIS-----------VEGRELLFNTSMVVDIAKLMKAYI 2048

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 305/693 (44%)
MYSc_Myo7 81..726 CDD:276832 293/663 (44%)
IQ 765..785 CDD:197470 5/19 (26%)
DUF4355 827..>887 CDD:290964 13/59 (22%)
MyTH4 1031..1239 CDD:295320 50/266 (19%)
B41 1248..1429 CDD:214604 32/218 (15%)
FERM_N 1248..>1288 CDD:286467 8/44 (18%)
FERM_B-lobe 1342..1429 CDD:271216 13/96 (14%)
PH-like 1454..1547 CDD:302622 14/92 (15%)
MyTH4 1674..1819 CDD:214535 40/201 (20%)
B41 1827..2032 CDD:214604 44/271 (16%)
FERM_N 1829..>1877 CDD:286467 8/48 (17%)
FERM_M 1936..2032 CDD:278785 24/157 (15%)
FERM_C2_MyoVII 2028..2121 CDD:270020 18/96 (19%)
myo10XP_005171458.1 MYSc 64..740 CDD:214580 304/688 (44%)
MYSc_Myo10 77..728 CDD:276840 293/663 (44%)
IQ 742..764 CDD:197470 7/21 (33%)
MYO10_CC 914..964 CDD:293340 8/63 (13%)
PH-like 1192..>1234 CDD:302622 7/41 (17%)
PH2_MyoX 1226..1327 CDD:270108 22/158 (14%)
PH 1226..1319 CDD:278594 22/150 (15%)
PH-like 1392..1516 CDD:302622 25/140 (18%)
PH 1405..1506 CDD:278594 18/111 (16%)
MyTH4 1599..1704 CDD:279165 28/110 (25%)
B41 1712..1969 CDD:214604 44/272 (16%)
UBQ 1716..1797 CDD:294102 14/88 (16%)
FERM_M 1810..1969 CDD:278785 26/165 (16%)
FERM_C_MyoX 1965..2053 CDD:270023 18/96 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100101
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.710

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