DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and myo9b

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_005171391.1 Gene:myo9b / 560956 ZFINID:ZDB-GENE-030131-938 Length:1974 Species:Danio rerio


Alignment Length:2035 Identity:503/2035 - (24%)
Similarity:805/2035 - (39%) Gaps:615/2035 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 PRKGEYVWVKPQNTTSEFAVPFGA----------RIVRTEKTQTLVCDDRNKQFWVPAGDVLKAM 61
            |||.:.  ..||:....||:..|:          ..||.||              |..|.|.:..
Zfish    91 PRKAQL--KHPQSDGYFFALQEGSYDRSMHYDIMSSVRREK--------------VAQGLVTRGF 139

  Fly    62 HITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRN 126
            .....::.:|:..|.||.|.:||..|::|:.||.|||:..::|:|:||::.||||..|.:::|.|
Zfish   140 VSQQPQEYDDLCNLPDLTEESILETLRHRFHKQKIYTFASNILIAVNPFKFLPIYNPRYVKMYEN 204

  Fly   127 KSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAIS--GKHSWIEQ 189
            .:|.:|.||:|||:|.||..:...:.|||:|||||||:|||:||..::..|.|:|  |..|.:|:
Zfish   205 HTLGKLEPHVFAIADAAFHTMMNKRVNQCIVISGESGSGKTQSTNFLIHCLTALSQKGYTSGVER 269

  Fly   190 QIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNY 254
            .|:.|.|::||||||||..|:|||||||:|::.:...|.::||.:::|||||.|:|.:.:.||||
Zfish   270 TILGAGPVLEAFGNAKTAYNNNSSRFGKFIQVNYLESGVVRGAVVEKYLLEKCRLVSRGKTERNY 334

  Fly   255 HIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGD----AKDFADIRAAMKVLSFK 315
            |:||.:|.|.|..||:..||.:  |:.||||.:    .:|...|    ..:|..:..||:::.|.
Zfish   335 HVFYYLLIGASEEERDEFKLLQ--PNDYHYLKE----EMPISEDQAEMTHEFRRLHQAMEMVGFL 393

  Fly   316 PEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIF 380
            |.....|.|:|:|||:|||:.:...:|........|..  |..::.||.:.:..|..|||.|...
Zfish   394 PPTKKQIFSVLSAILYLGNVTYKPKDVGEGLKVGPDHV--LSALSDLLKVKVELLVEALTTRKAM 456

  Fly   381 VHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVD----QPMNSIGVLDIFGF 441
            ...:.:....|...||..||:..||||..:|..||.|||..:..:.|    .|..||||||||||
Zfish   457 TANDKLILPYSLNEAITARDSMAKSLYSALFDWIVLRINHALLNKRDLEDSVPCLSIGVLDIFGF 521

  Fly   442 ENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNL 506
            |:|..|||||.|||||||.||.:....||.:||:||..|.|.|..::|.||...:.|...||..|
Zfish   522 EDFKTNSFEQFCINYANEQLQYYCNQRIFTLEQEEYLAEGITWHTVDFPDNIGCISLFSKKPTGL 586

  Fly   507 MSLIDEESKFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRD 571
            ..|:||||.||:.||.|||||...||.:...:|:....:.: |.|.|:||.|.|....|.|||.|
Zfish   587 FFLLDEESNFPQATDSTLLEKFKQQHQDNPFFVQTPVREPA-FVILHFAGKVKYQIKDFREKNTD 650

  Fly   572 SFSGD---------------------------------LRTL----------------------- 580
            ....|                                 :|||                       
Zfish   651 HMRPDIVALLRSSECSYLRQLIGANPVAVFRWGILRATIRTLAVFNKAGRTWAEKHPDEIRRYSR 715

  Fly   581 ---------------VQR----------------------------------------------- 583
                           :||                                               
Zfish   716 RSFGESRRPSPTVPTIQRLKSQSRIDFSFDRSEEDPLEAFEDIFATFESKKELHAKVLRSLRQFG 780

  Fly   584 ---------STN-------------------------------KYLVDIFPHE------MPMDTA 602
                     |||                               |:::.:..|.      :.:.|.
Zfish   781 VEVPQKLRLSTNSSRKYRLFSQKNRPNKHKQLIPKNLIDSHSLKFIMALTQHNRVTRSLLHLHTK 845

  Fly   603 KKQPTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRR 667
            ||.|::..:|:.||..|:.||.:|.|:|:|||:.|..|...:||..|.::||||:||::|.||||
Zfish   846 KKPPSISAQFQASLSKLLETLRKAEPFFVRCIRSNGDKREMHFDDALVLQQLRYTGMLQTVRIRR 910

  Fly   668 AGYPIRHAYRAFVERYRLLVPPVGPLEQCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDDAS 732
            :||..:..:|.|::::|:|:|......|.|...|   :.::.||. |..|.|:||:||::.:...
Zfish   911 SGYGAKFTFREFIDQFRVLLPKEISTPQEDITNL---LTKMGLPG-SSFQIGQTKVFLKESERQI 971

  Fly   733 LELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGAC 797
            |:....:.:::.|:.:||..|..|.|:...|.|:.|||:||.||         .:|:.:      
Zfish   972 LQETLHKEVMRRIIILQRWFRACLMRKQYLRGRKGIITIQRSWR---------YVRETY------ 1021

  Fly   798 IAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQKKLLERRKQNQLKKEELLKLAKMKEAEELLR 862
                         |||.    |:                                          
Zfish  1022 -------------RCRA----AI------------------------------------------ 1027

  Fly   863 LQQLKEQKEREQREQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRTKPVKQEAPKAP----TLQ 923
            :.|:..:|.| ||.:|||       |||:|..|:   :..:::|:.::|  :..|..|    |.:
Zfish  1028 VIQIAWRKSR-QRAEQEK-------LKAQAFQRD---LNKIEEKKPSQP--KPLPSLPNESRTAE 1079

  Fly   924 ARNSLPPPPTTLIVAAP-LPTRPASAVTRINTIPESP-GTIDVESSKQMVDDVFRFLNDEPDAAL 986
            ::.:..|.|.......| :||:|...:|:..::.|.. |    .|::.||.:..|  :..|....
Zfish  1080 SKKTDEPRPQLNTDTKPKIPTQPTPGITKQLSVKEDRLG----RSNRGMVGNKER--HPSPSGLP 1138

  Fly   987 RKLNNISSGDTIRLPKSVPNNIDTSDFSYLKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMA 1051
            |             |.|:|.|:..|.::..::         |.|.:|:.....|.:......|.:
Zfish  1139 R-------------PVSLPLNMSQSAYNDSQH---------TVQLQRQNKSNRLTEKPEKWKERS 1181

  Fly  1052 SKAIWLTILRFMGDLPDVVSSPTLH------------VFDNENLMSDLASLLNTSDS-------Y 1097
            |.|      ..||::.::  .|..|            ..||.:.||...|..:.|.|       .
Zfish  1182 SDA------ARMGNIDEI--KPRSHEKIGFLKPGISLSLDNVSRMSSSESDSSASSSRNEVMVEN 1238

  Fly  1098 KPRLFVRQSQRRIPKPLASGEKE-----AQEFYQHWLNVPTSHL---EKIHFIIGHGIIKNSLRD 1154
            :.||   :.:||:.:| .||.|.     :...|..:...|.|..   :.|..::...::::|:..
Zfish  1239 RKRL---KHKRRLARP-RSGLKVDDLDLSDSAYWSFPLPPISPAAPNQSITQVVVEAVMQSSVES 1299

  Fly  1155 EILAQICKQLYLNPSRSSYSRGWLLLSLCLSCFP-----PSKEF---------EPHLRSFMKQGT 1205
            :                             .|||     ||:|.         :..|:.|.|:.|
Zfish  1300 D-----------------------------GCFPFSNRSPSEEVIAPSITPERKGFLKFFKKRST 1335

  Fly  1206 AQLQATPSLQRL--ERTLVNGPRCQPPSLFELHAIRGRH--PLRLDIHLMDGQQRRLQVD-AAST 1265
            .|......::.|  :..|.:|.....|.........|.|  |.     :...:..|.||. .||.
Zfish  1336 PQDGTITMVKTLAEKEELASGNHSNSPRTKNSGTYPGAHRNPT-----IKISRATRTQVQWNASL 1395

  Fly  1266 AREAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGAGQEHVLDAISECEQRQLDAPWKLYIR---- 1326
            .||          :|||          .:|..|.....:.::.:| ...::|....|::..    
Zfish  1396 DRE----------ITDT----------NELRHLDEFLGNQMNDLS-TRSKELSETEKIFFTATTQ 1439

  Fly  1327 -KEMFATWY---DPSMDPKATQLIYKQILNGLKCGEYRCRSEKDIAMVCALACFVEYGPGEILRL 1387
             :|...:.|   :||:..|.....|::.::.| .|:.:. ||..:                ::.|
Zfish  1440 FRETIKSMYSISNPSIGYKVLMSGYQKKVDSL-AGKKKA-SEVPL----------------VVNL 1486

  Fly  1388 KPSEITAFVPSDLLAPGERAIENWSRLIAATYEKSSYVKEEQNDLLLEAQKRAKEDICLFAHLSW 1452
            ..|.:..|:..:|           .|:.|    :...|||..       ::::|.:    ||...
Zfish  1487 FQSVLDGFIRGEL-----------KRIDA----EPCKVKERN-------RRKSKRE----AHPDS 1525

  Fly  1453 PMRHSRLFEVVRKEGPKL--QSDELMLGINSAGLFLIDETEQVLASCCFSEV---LKVHV----E 1508
            |:.|  ||...:....:.  |....:.|:..|  |:....:.|....|.|::   ...|.    |
Zfish  1526 PLGH--LFSTYQVTIMQSCDQCTSYIWGMEKA--FMCSSCKMVCHKKCLSKITINCTAHYIRKKE 1586

  Fly  1509 SDDKLH--------VMTFQHVNFVLQ-------------------CSSAQDANEVINYMLDNLRQ 1546
            .:..||        |.....|.|||:                   ..:|..|.|     |....:
Zfish  1587 GEHTLHFGVPLCALVHAADSVPFVLEQMLVHVEMNGLYTEGIYRKSGAACRAKE-----LHQKLE 1646

  Fly  1547 RSSYGVALD--PV--VEGDLEDCLVLNPGDLIEFEAGVTGAQLMAGNAQDCYRGCVNGQWGQFLA 1607
            :..:.|:||  |:  |.|.::..|...|..|:.:..                       :..|| 
Zfish  1647 KDPHTVSLDTYPIHTVTGLVKQWLRELPDPLMTYSL-----------------------YNDFL- 1687

  Fly  1608 GNVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFREPLDSDKAPLS 1672
                ....|.:.||:|:.:.|  :.:|.|            ..|||.|....|.....:.:...:
Zfish  1688 ----YAVDLPETSERLRAVYR--KLEELP------------SSNISTLERLIFHLVKVAKEEEHN 1734

  Fly  1673 KFSPEPLKAPLLKAVVKVP----PLFQQALVMHHHILKYMGDIARSNLPVNTDLIFQPALQHPLL 1733
            :.|.:.|.......:::.|    ||..            |.||.::.|.|  :::.:..::.   
Zfish  1735 RMSADSLAIVFAPCILRCPDSSDPLLS------------MKDINKTTLCV--EILIKEQIRR--- 1782

  Fly  1734 CDELYCQLMKQLSDNPSSES 1753
                |.|.|:::....|:|:
Zfish  1783 ----YNQKMEEIQQLESAEA 1798

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 282/848 (33%)
MYSc_Myo7 81..726 CDD:276832 275/818 (34%)
IQ 765..785 CDD:197470 8/19 (42%)
DUF4355 827..>887 CDD:290964 8/59 (14%)
MyTH4 1031..1239 CDD:295320 44/250 (18%)
B41 1248..1429 CDD:214604 34/189 (18%)
FERM_N 1248..>1288 CDD:286467 10/40 (25%)
FERM_B-lobe 1342..1429 CDD:271216 14/86 (16%)
PH-like 1454..1547 CDD:302622 23/128 (18%)
MyTH4 1674..1819 CDD:214535 15/84 (18%)
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
myo9bXP_005171391.1 UBQ 13..110 CDD:294102 7/20 (35%)
MYSc 147..974 CDD:214580 282/839 (34%)
MYSc_Myo9 159..965 CDD:276836 275/818 (34%)
C1 1529..1577 CDD:237996 10/51 (20%)
RhoGAP 1593..1778 CDD:295372 42/245 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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