DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and MYO1A

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_005370.1 Gene:MYO1A / 4640 HGNCID:7595 Length:1043 Species:Homo sapiens


Alignment Length:813 Identity:291/813 - (35%)
Similarity:453/813 - (55%) Gaps:75/813 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 VEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELP 133
            |||::.|..|.|.::|:|||.||..:.||||.|::::::||||.||||....|..|::.:..||.
Human    10 VEDLVLLEPLVEESLLKNLQLRYENKEIYTYIGNVVISVNPYQQLPIYGPEFIAKYQDYTFYELK 74

  Fly   134 PHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKH---SWIEQQIIEAN 195
            |||:|:::.|:|.|:....:||::|:||||:||||::||::.|:||:.||.   :.:::|::::|
Human    75 PHIYALANVAYQSLRDRDRDQCILITGESGSGKTEASKLVMSYVAAVCGKGEQVNSVKEQLLQSN 139

  Fly   196 PIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCM 260
            |::||||||||:||:||||||||::|.|..:|:..|..|..|||||||:|.|.:.|||:||||.:
Human   140 PVLEAFGNAKTIRNNNSSRFGKYMDIEFDFKGSPLGGVITNYLLEKSRLVKQLKGERNFHIFYQL 204

  Fly   261 LAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSL 325
            |||......:.||| |:..:.|.|| ......:.|..||..|..:::||.|:.|..||:..:|.:
Human   205 LAGADEQLLKALKL-ERDTTGYAYL-NHEVSRVDGMDDASSFRAVQSAMAVIGFSEEEIRQVLEV 267

  Fly   326 LAAILHLGNLRFTATE--VANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTT 388
            .:.:|.|||: ..|.|  .:.:..:.|.|...::.:.:::|:....:..||..||:....|.|.|
Human   268 TSMVLKLGNV-LVADEFQASGIPASGIRDGRGVREIGEMVGLNSEEVERALCSRTMETAKEKVVT 331

  Fly   389 SLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQLC 453
            :|:...|...|||..|::|..:|..||.||||:|...:.:....:|||||:|||..::|||||..
Human   332 ALNVMQAQYARDALAKNIYSRLFDWIVNRINESIKVGIGEKKKVMGVLDIYGFEILEDNSFEQFV 396

  Fly   454 INYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPK 518
            |||.||.|||.|:....|.||:||:.|.|.|..:::.||..|..||......:::::|||...| 
Human   397 INYCNEKLQQVFIEMTLKEEQEEYKREGIPWTKVDYFDNGIICKLIEHNQRGILAMLDEECLRP- 460

  Fly   519 G--TDQTLLEKLH---VQHGNRSIYVKGKTTQT-----------SLFGIRHYAGVVMYNPLGFLE 567
            |  :|.|.|.||:   .:||    :.:.|.||.           |.|.|.||||.|.||...|::
Human   461 GVVSDSTFLAKLNQLFSKHG----HYESKVTQNAQRQYDHTMGLSCFRICHYAGKVTYNVTSFID 521

  Fly   568 KNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMDTA-KKQPTLCVKFRNSLDMLMRTLSQAHPYFI 631
            ||.|....||...:.::.:..|..:||...|...: |:.||...:|::|:.:||:.|....|.:|
Human   522 KNNDLLFRDLLQAMWKAQHPLLRSLFPEGNPKQASLKRPPTAGAQFKSSVAILMKNLYSKSPNYI 586

  Fly   632 RCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQC 696
            |||||||:::...|..:|...|.||.|::|..|:|||||..|..|..|:||||||.....|....
Human   587 RCIKPNEHQQRGQFSSDLVATQARYLGLLENVRVRRAGYAHRQGYGPFLERYRLLSRSTWPHWNG 651

  Fly   697 DCRKLARQICEVALPADSDRQYGKTKLFLRD-------EDDASLELQRSQLMLKSIVTIQRGIRR 754
            ..|:...::......:..:..:||||:|:|.       |:...|.||:...:::.   |.||.| 
Human   652 GDREGVEKVLGELSMSSGELAFGKTKIFIRSPKTLFYLEEQRRLRLQQLATLIQK---IYRGWR- 712

  Fly   755 VLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQA 819
              .|.:.:..|::.|.:..::||.:|::.|                       ..::...:.:||
Human   713 --CRTHYQLMRKSQILISSWFRGNMQKKCY-----------------------GKIKASVLLIQA 752

  Fly   820 LSRGYLVRKDFQKKLLERRKQNQLKKEELLKLA 852
            ..||:..||:::|         ..:.|..|.||
Human   753 FVRGWKARKNYRK---------YFRSEAALTLA 776

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 258/666 (39%)
IQ 765..785 CDD:197470 5/19 (26%)
Atrophin-1 <820..>946 CDD:460830 9/33 (27%)
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
MYO1ANP_005370.1 MYSc_Myo1 22..681 CDD:276829 258/666 (39%)
Actin-binding. /evidence=ECO:0000255 571..593 10/21 (48%)
IQ 742..764 CDD:197470 6/21 (29%)
Myosin_TH1 847..1042 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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