DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and MYO1B

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_047300366.1 Gene:MYO1B / 4430 HGNCID:7596 Length:1156 Species:Homo sapiens


Alignment Length:1152 Identity:369/1152 - (32%)
Similarity:572/1152 - (49%) Gaps:203/1152 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 WVPAGDVLKAMH--------ITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAI 107
            |...|..|:.|.        :.:...|.||:.|..|.|.|.:.||:.|:....||||.||:::::
Human    11 WGRRGSELETMAKMEVKTSLLDNMIGVGDMVLLEPLNEETFINNLKKRFDHSEIYTYIGSVVISV 75

  Fly   108 NPYQILPIYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKL 172
            |||:.||||:..:::.|||::..||.|||||:||.|::.|:...::||::|:|||||||||::||
Human    76 NPYRSLPIYSPEKVEEYRNRNFYELSPHIFALSDEAYRSLRDQDKDQCILITGESGAGKTEASKL 140

  Fly   173 ILQYLAAISGKHSWIEQ---QIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARI 234
            ::.|:||:.||.:.:.|   |::::||::||||||||||||||||||||::|.|..:|...|..|
Human   141 VMSYVAAVCGKGAEVNQVKEQLLQSNPVLEAFGNAKTVRNDNSSRFGKYMDIEFDFKGDPLGGVI 205

  Fly   235 QQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDA 299
            ..|||||||:|.|.|.|||:|:||.:|:|.|.....:||| |:..|:|:||:.... .:.|..||
Human   206 SNYLLEKSRVVKQPRGERNFHVFYQLLSGASEELLNKLKL-ERDFSRYNYLSLDSA-KVNGVDDA 268

  Fly   300 KDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRF-TATEVANLATAEIDDTPNLQRVAQLL 363
            .:|..:|.||:::.|...|..|:|:::||:|.|||:.| ..:.|..|..::|.|...|:.:.:|.
Human   269 ANFRTVRNAMQIVGFMDHEAESVLAVVAAVLKLGNIEFKPESRVNGLDESKIKDKNELKEICELT 333

  Fly   364 GIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQ 428
            ||..|.|..|.:.||:....|.|:|:|:...|...|||..|:||..:|..:|.||||:|..|...
Human   334 GIDQSVLERAFSFRTVEAKQEKVSTTLNVAQAYYARDALAKNLYSRLFSWLVNRINESIKAQTKV 398

  Fly   429 PMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQ 493
            ....:|||||:|||.|::|||||..|||.||.|||.|:....|.||:||..|.|.|.||::.:|.
Human   399 RKKVMGVLDIYGFEIFEDNSFEQFIINYCNEKLQQIFIELTLKEEQEEYIREDIEWTHIDYFNNA 463

  Fly   494 QILDLIGMKPMNLMSLIDEESKFP-KGTDQTLLEKLHV-----QH-----GNRSIYVKGKTTQTS 547
            .|.|||......:::::|||...| ..||:|.||||:.     ||     ...|.::...:...|
Human   464 IICDLIENNTNGILAMLDEECLRPGTVTDETFLEKLNQVCATHQHFESRMSKCSRFLNDTSLPHS 528

  Fly   548 LFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMD-TAKKQPTLCVK 611
            .|.|:||||.|:|...||::||.|....||...:.::::..:..:||...|.. ..|:.||...:
Human   529 CFRIQHYAGKVLYQVEGFVDKNNDLLYRDLSQAMWKASHALIKSLFPEGNPAKINLKRPPTAGSQ 593

  Fly   612 FRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAY 676
            |:.|:..||:.|...:|.:|||||||:.|....|::.|...|:||.|::|..|:|||||..|.||
Human   594 FKASVATLMKNLQTKNPNYIRCIKPNDKKAAHIFNEALVCHQIRYLGLLENVRVRRAGYAFRQAY 658

  Fly   677 RAFVERYRLLVPPVGPLEQCDCRKLARQIC-EVALPADSDRQYGKTKLFLRD------------- 727
            ...:|||::|.....|..:...|.....:. |:.:|.: :..:|::|:|:|:             
Human   659 EPCLERYKMLCKQTWPHWKGPARSGVEVLFNELEIPVE-EYSFGRSKIFIRNPRTLFKLEDLRKQ 722

  Fly   728 --EDDAS---------------LELQRSQLML-----------------KSIVTIQRGIR----R 754
              ||.|:               |.:::||:::                 .|.:.||..||    |
Human   723 RLEDLATLIQKIYRGWKCRTHFLLMKKSQIVIAAWYRRYAQQKRYQQTKSSALVIQSYIRGWKAR 787

  Fly   755 VLFR--RYMKRYREAIITVQRYWRGRLQRRKYQVMRQ---GFHRLGACIAAQQLTTKFTMVRCRT 814
            .:.|  ::.||.:||:.|:..||.|...||:.:.:::   ..|.: |.|.|..|.:| .....:.
Human   788 KILRELKHQKRCKEAVTTIAAYWHGTQARRELRRLKEEARNKHAI-AVIWAYWLGSK-ARRELKR 850

  Fly   815 IKLQALSR-----------GYLVRKDFQ--------KKLLERRKQNQLKKEELLKLAKM------ 854
            :|.:|..:           |..||::::        ||:.|...|..::|..|....||      
Human   851 LKEEARRKHAVAVIWAYWLGLKVRREYRKFFRANAGKKIYEFTLQRIVQKYFLEMKNKMPSLSPI 915

  Fly   855 ----------------KEAEELLRLQQLKEQKEREQREQQEKRLQEEQRLKAEAAA----RNALA 899
                            ||.:.:..|.:.|  |.|:|...|:|.:.||   |.||:.    :.||.
Human   916 DKNWPSRPYLFLDSTHKELKRIFHLWRCK--KYRDQFTDQQKLIYEE---KLEASELFKDKKALY 975

  Fly   900 MAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTIPESPGTIDV 964
            .::|.|     |.:                                 .|...||..|:.....|.
Human   976 PSSVGQ-----PFQ---------------------------------GAYLEINKNPKYKKLKDA 1002

  Fly   965 ESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVPNNIDTSD------------FSYLK 1017
            ...|.::.:|           :.|:|..:...|.|:.....||:..:|            ....|
Human  1003 IEEKIIIAEV-----------VNKINRANGKSTSRIFLLTNNNLLLADQKSGQIKSEVPLVDVTK 1056

  Fly  1018 YAATYFGGGATAQHERKPLKKS-----LLKHEHPIDEMASKAIWLTI 1059
            .:.:....|..|.|.::..:.:     |...:|.| |||:|....|:
Human  1057 VSMSSQNDGFFAVHLKEGSEAASKGDFLFSSDHLI-EMATKLYRTTL 1102

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 271/661 (41%)
IQ 765..785 CDD:197470 8/19 (42%)
Atrophin-1 <820..>946 CDD:460830 30/170 (18%)
MyTH4 1031..1239 CDD:470587 9/34 (26%)
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
MYO1BXP_047300366.1 MYSc_Myo1 49..708 CDD:276829 271/661 (41%)
IQ 769..791 CDD:197470 6/21 (29%)
Myosin_TH1 961..1138 CDD:461801 34/192 (18%)
Blue background indicates that the domain is not in the aligned region.

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