Protein Alignment Myo28B1 and Prm

DIOPT Version :9

• Sequence 1: NP_723294.1
• Gene: Myo28B1 / 53515
• FlyBaseID: FBgn0040299
• Length: 2122
• Species: Drosophila melanogaster
• Sequence 2: NP_523982.2
• Gene: Prm / 39002
• FlyBaseID: FBgn0003149
• Length: 879
• Species: Drosophila melanogaster
• Alignment Length: 1015
• Identity: 180/1015 - (17%)
• Similarity: 328/1015 - (32%)
• Gaps: 359/1015 - (35%)

  Fly    67 EDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAE 131
            |.::|:.:|..|::.  :|.||:                        .:...||::....:..|:
  Fly    29 EYIQDLSSLSRLEDK--IRLLQD------------------------DLEVERELRQRIEREKAD 67

  Fly   132 LPPHIFAISDNAFQRLQRLKENQCVVISGESGAG-------------------------KTESTK 171
            |...:..:|       :||:|       .|.||.                         ::|.|.
  Fly    68 LSVQVIQMS-------ERLEE-------AEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETT 118

  Fly   172 LILQYLAAISGKHSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQ 236
            |:|:      .||          |.|:..|.....:...|.:|
  Fly   119 LLLK------KKH----------NEIITDFQEQVEILTKNKAR---------------------- 145

  Fly   237 YLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERL------------------KLQEQSPSQYH 283
              .||.:..||:.       .|.:|:.:.:..:|::                  |::|.:.:...
  Fly   146 --AEKDKAKFQTE-------VYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVID 201

  Fly   284 YLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSIL--------------SLLAAILH--- 331
            ..:.....:.......||..|::..:..:||...:|.|.|              |||.:.||
  Fly   202 ISSHRSRLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVE 266

  Fly   332 --LGNLRFTATEVA--------NLATAEIDDT--------------PNLQRVAQLLGIPISALNA 372
              |.::|....|.:        .|..|..|.|              ..::.:.:...:.|:.|..
  Fly   267 IELDSVRNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEE 331

  Fly   373 ALTQRTIFVHG-EHVTTSLSKEAAI-----EGRDAFVKSLYDGI------FVRIVRRINETI--- 422
            .:....:.|:. |.:.|.|:.|..:     |..:...:.|...:      .|.:..|::|||
  Fly   332 HIESLIVKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILY 396

  Fly   423 --------NKQVDQPMNSIGVLDIFGFENFDNNSFEQL----------------CINYANENLQQ 463
                    ||..|. :.::..||    :..|||:  ||                .||..|..|
  Fly   397 ETSQRDLKNKHADL-VRTVHELD----KVKDNNN--QLTRENKKLGDDLHEAKGAINELNRRL-- 452

  Fly   464 FFVGHIFKMEQDEYQNE--HINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLE 526
                |..::|....:||  .:...:.|.:..::..:..|.:      |..:.:::....::.|.|
  Fly   453 ----HELELELRRLENERDELTAAYKEAEAGRKAEEQRGQR------LAADFNQYRHDAERRLAE 507

  Fly   527 KLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVD 591
            |        ...::....|||:       .:...|......:.|      |:|.|.|...|..:.
  Fly   508 K--------DEEIEAIRKQTSI-------EIEQLNARVIEAETR------LKTEVTRIKKKLQIQ 551

  Fly   592 IFPHEMPMDTAKKQPTLCVKFRNSLDM--------LMRTLSQAHPYFIRCIKPNEYKEPK----- 643
            |...||.:|.|.|         .::|:        |..|..|||           |::.:
  Fly   552 ITELEMSLDVANK---------TNIDLQKVIKKQSLQLTELQAH-----------YEDVQRQLQA 596

  Fly   644 NFDKELCVRQLRYSGMM-ETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCDC------RKL 701
            ..| :..|.|.|.:|:. |...:|........|.|....:|......:..|...:.      .||
  Fly   597 TLD-QYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKL 660

  Fly   702 ARQICEVALPADSDRQYGKTKLFLRDEDDASLELQRSQLMLKSIV-TIQRGIRRVLFRRYMKRYR 765
            .:::..||    ||.:....:|.:.||     ..|:.|:.||.:| .:.....|::....:|:..
  Fly   661 EQELSVVA----SDYEEVSKELRISDE-----RYQKVQVELKHVVEQVHEEQERIVKLETIKKSL 716

  Fly   766 EAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDF 830
            |..:.       .|..|..:|      .|.|...::::.:|.. .|.|.::|:
  Fly   717 EVEVK-------NLSIRLEEV------ELNAVAGSKRIISKLE-ARIRDLELE------------ 755

  Fly   831 QKKLLERRKQNQL-------KKEELLK--LAKMKEAEE-LLRLQ---------------QLKEQK 870
                ||..|:...       |||..:|  |.:.:|.:: |:.||               ||.||:
  Fly   756 ----LEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQE 816

  Fly   871 -EREQREQQEKRLQEEQRLKAEAAARNALAMAAVQQKRRT 909
             ..:|...:.:|.|.|.....:.|.....::..::.|.||
  Fly   817 GVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHRT 856

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Myo28B1	NP_723294.1	MYSc	62..737	CDD:214580	139/814 (17%)
		MYSc_Myo7	81..726	CDD:276832	133/789 (17%)
		IQ	765..785	CDD:197470	3/19 (16%)
		DUF4355	827..>887	CDD:290964	20/85 (24%)
		MyTH4	1031..1239	CDD:295320
		B41	1248..1429	CDD:214604
		FERM_N	1248..>1288	CDD:286467
		FERM_B-lobe	1342..1429	CDD:271216
		PH-like	1454..1547	CDD:302622
		MyTH4	1674..1819	CDD:214535
		B41	1827..2032	CDD:214604
		FERM_N	1829..>1877	CDD:286467
		FERM_M	1936..2032	CDD:278785
		FERM_C2_MyoVII	2028..2121	CDD:270020
Prm	NP_523982.2	Myosin_tail_1	<34..853	CDD:279860	175/1005 (17%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45466265
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840