Protein Alignment Myo28B1 and ck

DIOPT Version :10

• Sequence 1: NP_723294.1
• Gene: Myo28B1 / 53515
• FlyBaseID: FBgn0040299
• Length: 2122
• Species: Drosophila melanogaster
• Sequence 2: NP_523571.1
• Gene: ck / 34882
• FlyBaseID: FBgn0000317
• Length: 2167
• Species: Drosophila melanogaster
• Alignment Length: 2231
• Identity: 991/2231 - (44%)
• Similarity: 1372/2231 - (61%)
• Gaps: 209/2231 - (9%)

  Fly     9 KGEYVWVKPQNTTSEFAVPFGARIVRTEKTQTLVCDDRNKQFWVPAGDVLKAMHITSQEDVEDMI 73
            :|:|:|::|. :..||.|..|||:|..|..:..|.||...:.|:.....:||||.:|.:.|||||
  Fly     6 RGDYIWIEPA-SGREFDVAIGARVVSAEGRRIQVRDDDGDEVWLAPERRIKAMHASSVQGVEDMI 69

  Fly    74 TLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIFA 138
            :||||.|..|||||..||.:.||||||||:|||:||||||||||..:|:||:.:.:.||||||||
  Fly    70 SLGDLHEAGILRNLLIRYKENLIYTYTGSILVAVNPYQILPIYTGDQIKLYKERKIGELPPHIFA 134

  Fly   139 ISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKHSWIEQQIIEANPIMEAFGN 203
            |.|||:..::|.:::||:|||||||||||||||||||||||||||||||||||:|||||:|||||
  Fly   135 IGDNAYAHMKRYRQDQCIVISGESGAGKTESTKLILQYLAAISGKHSWIEQQILEANPILEAFGN 199

  Fly   204 AKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAE 268
            |||:||||||||||||:|.|:..|.|:||:|:||||||||||.|:..|||||:|||:|||||..|
  Fly   200 AKTIRNDNSSRFGKYIDIHFSANGVIEGAKIEQYLLEKSRIVSQNHSERNYHVFYCILAGLSADE 264

  Fly   269 RERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLG 333
            :.||.|  ...:.|.||..|...|..||.||.:|:|||:|||||.|..:|:|.|:.||||:||.|
  Fly   265 KSRLDL--GMAADYKYLTGGNSITCEGRDDAAEFSDIRSAMKVLLFSDQEIWEIIKLLAALLHCG 327

  Fly   334 NLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEG 398
            |:::.||.|.||...||.:..|::|||.|||:||..|..|||:||:|.|||.|.::||::.:::.
  Fly   328 NIKYKATVVDNLDATEIPEHINVERVAGLLGLPIQPLIDALTRRTLFAHGETVVSTLSRDQSVDV 392

  Fly   399 RDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQLCINYANENLQQ 463
            ||||||.:|..:||.|||:||..|.|......|:|||||||||||||.|||||.|||||||||||
  Fly   393 RDAFVKGIYGRMFVHIVRKINTAIFKPRGTSRNAIGVLDIFGFENFDQNSFEQFCINYANENLQQ 457

  Fly   464 FFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQTLLEKL 528
            |||.||||:||:||.:|.||||||||.|||..||||.:|.:|:|:|||||::||||||||:|.||
  Fly   458 FFVQHIFKLEQEEYNHEAINWQHIEFVDNQDALDLIAIKQLNIMALIDEEARFPKGTDQTMLAKL 522

  Fly   529 HVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIF 593
            |..||:...|:|.|:...:.||:.|:||||.|:..|||:||||:||.||..||.:||||:|..||
  Fly   523 HKTHGSHKNYLKPKSDINTSFGLNHFAGVVFYDTRGFLDKNRDTFSPDLLHLVSQSTNKFLRQIF 587

  Fly   594 PH--EMPMDTAKKQPTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRY 656
            ..  ||..:|.|:.|||..:||.|||.||:|||...|:|||||||||.|:|..||:.||.|||||
  Fly   588 AQDIEMGAETRKRTPTLSTQFRKSLDALMKTLSSCQPFFIRCIKPNELKKPMMFDRGLCCRQLRY 652

  Fly   657 SGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCDCRKLARQICEVALPADSDRQYGKT 721
            ||||||.|||||||||||.:|.||||||.|:|.|.|..:.||:....:||.|.| ..||.|.|.|
  Fly   653 SGMMETIRIRRAGYPIRHGFREFVERYRFLIPGVPPAHRTDCQAATSRICAVVL-GKSDYQLGHT 716

  Fly   722 KLFLRDEDDASLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQV 786
            |:||:|..|..||.:|.:::.:.|:.:||.||..::||...|.|.|.|||||:|:|..||::|:.
  Fly   717 KVFLKDAHDLFLEQERDRVLTRKILILQRSIRGWVYRRRFLRLRAAAITVQRFWKGYAQRKRYRN 781

  Fly   787 MRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDF-------------QKKLLERR 838
            ||.|:.||.|.|.::.|:.:|..:|...:.|||.:||||||:::             .::::..|
  Fly   782 MRVGYMRLQALIRSRVLSHRFRHLRGHIVGLQAHARGYLVRREYGHKMWAVIKIQSHVRRMIAMR 846

  Fly   839 KQNQLKKE-----ELLKLAKMKEAEELLR----LQQLKEQKEREQREQQEKRLQEEQRLKAEAAA 894
            :..:|:.|     |:|:|.|::|.|.|.|    .:::.||..|::..:.|:|..:||   .|...
  Fly   847 RYRKLRLEHKQFAEVLQLRKLEEQELLHRGNKHAREIAEQHYRDRLHELERREIQEQ---LENRR 908

  Fly   895 RNALAMAAVQQKRRTKPVKQEAPKAPTLQARNSLPPPPTTLIVAAPLPTRPASAVTRINTIPESP 959
            |..:.|..:....|    |||.|
  Fly   909 RVEVNMNIINDAAR----KQEEP------------------------------------------ 927

  Fly   960 GTIDVESSKQMVDDVFRFLNDEPDAA--------------LRKLNNISSGDTIRLPKSVPNNIDT 1010
                |:..| :|:.:|.||.|....|              |....|::..|.|.......:..|.
  Fly   928 ----VDDGK-LVEAMFDFLPDSSSDAPTPHGGRETSVFNDLPHAQNVNQDDIIAPIHISEDEEDL 987

  Fly  1011 SDFSYLKYAATYFGGGATAQHERKPLKKSLLKHEHPIDEMASKAIWLTILRFMGDLPDVVSSPTL 1075
            |:|.:.|:|||||.|....|:.:|.||..||......|::|::|:|:|||||.||:|:    |..
  Fly   988 SEFKFQKFAATYFQGNVNHQYAKKALKHPLLPLHTQGDQLAAQALWITILRFTGDMPE----PKY 1048

  Fly  1076 HVFDNENLMSDLASLLNT-------SDSYK--------PRLFVRQSQRRIPKPLAS--------- 1116
            |..|..:..|.::.:..|       |..::        |..|::|..|.|...|.|
  Fly  1049 HTMDRMDTTSVMSKVTATLGRNFIRSKEFQEAQLMGLDPDAFLKQKPRSIRHKLVSLTLKRKNKL 1113

  Fly  1117 GE---------KEAQEFYQHWL-NVPTSHLEKIHFIIGHGIIKNSLRDEILAQICKQLYLNPSRS 1171
            ||         :...:.||.|| :.|||:|||:||||||||::..|||||..||||||..||.:|
  Fly  1114 GEDVRRRLQDDEYTADSYQSWLQSRPTSNLEKLHFIIGHGILRAELRDEIYCQICKQLTNNPLKS 1178

  Fly  1172 SYSRGWLLLSLCLSCFPPSKEFEPHLRSFMKQGTAQLQATPSLQRLERTLVNGPRCQPPSLFELH 1236
            |::|||:|||||:.||.||::|..:||:|:::|... .|....:||:||..||.|.||||..||.
  Fly  1179 SHARGWILLSLCVGCFAPSEKFVNYLRAFIREGPPG-YAPYCEERLKRTFNNGTRNQPPSWLELQ 1242

  Fly  1237 AIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGAG 1301
            |.:.:.|:.|.|..|||..:.|..|:|:||||..|||...:.|.|.|||.|.::|..|:..||:|
  Fly  1243 ATKSKKPIMLPITFMDGNTKTLLADSATTARELCNQLSDKISLKDQFGFSLYIALFDKVSSLGSG 1307

  Fly  1302 QEHVLDAISECEQ-------RQLDAPWKLYIRKEMFATWYDPSMDPKATQLIYKQILNGLKCGEY 1359
            .:||:||||:|||       ::.:|||:|:.|||:||.|::|:.|..||.|||:|::.|:|.|||
  Fly  1308 GDHVMDAISQCEQYAKEQGAQERNAPWRLFFRKEIFAPWHEPTHDQVATNLIYQQVVRGVKFGEY 1372

  Fly  1360 RCRSEKDIAMVCALACFVEYGPG----EILRLKPSEITAFVPSDLLAPGERAIENWSRLIAATYE 1420
            ||..|:|:||:.|...|:||...    .:..|.|:    |:|...|:..::|||.|:.|:...|:
  Fly  1373 RCDKEEDLAMIAAQQYFIEYSTDMSMERLFTLLPN----FIPDFCLSGVDKAIERWAALVLQAYK 1433

  Fly  1421 KSSYVKEEQNDLLLEAQKRAKEDICLFAHLSWPMRHSRLFEVVRKEGPKLQSDELMLGINSAGLF 1485
            ||.|||::      .|..:.||||..:|...||:..||.:|..|..||.|..:::::.:|..|::
  Fly  1434 KSYYVKDK------IAPLKIKEDIVSYAKYKWPLLFSRFYEAYRNSGPNLPKNDVIIAVNWTGVY 1492

  Fly  1486 LIDETEQVLASCCFSEVLKVHVESDDKLHVMTF-----QHVNFVLQCSSAQDANEVINYMLDNLR 1545
            ::|:.||||....|.|:..|..:..:|:...||     :...|..|..:|:|..:::.|.||.|:
  Fly  1493 VVDDQEQVLLELSFPEITAVSSQKTNKVFTQTFSLSTVRGEEFTFQSPNAEDIRDLVVYFLDGLK 1557

  Fly  1546 QRSSYGVAL-DPVVEGDLEDCLVLNPGDLIEFEAGVTGAQLMAGNAQDCYRGCVNGQ-WGQFLAG 1608
            :||.|.:|| |.....|....|....||||..|....|..::  |...|...|...| .|.|.|.
  Fly  1558 KRSKYVIALQDYRAPSDGTSFLSFFKGDLIILEDESCGESVL--NNGWCIGRCDRSQERGDFPAE 1620

  Fly  1609 NVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRR--------------RQHNISQLAESH 1659
            .|.||.||:||.   ||||.....:|       |::.||              |.|.:.:.|..|
  Fly  1621 TVYVLPTLSKPP---QDILALFNIEE-------AHHGRRLSMASNGGAVEPRDRPHTLMEYALDH 1675

  Fly  1660 FREP----------LDSDKA-PLSKFSPEPLKAPLLKAVVKVPPLFQQALVMHHHILKYMGDIAR 1713
            ||.|          |.|.:: .|.::|.:|:|||||:.:.......::|......|||||||:..
  Fly  1676 FRLPPKRTMSKTLTLSSKRSEELWRYSRDPIKAPLLRKLQSKEEFAEEACFAFAAILKYMGDLPS 1740

  Fly  1714 SNLPVN---TDLIFQPALQHPLLCDELYCQLMKQLSDNPSSESEKRGWDLLYLATGLVAPSVLVM 1775
            ....:.   ||.||...|:|.:|.||:||||||||:||.:..||:|||:|::|||||.|.|..::
  Fly  1741 KRPRMGNEITDHIFDGPLKHEILRDEIYCQLMKQLTDNRNRMSEERGWELMWLATGLFACSQGLL 1805

  Fly  1776 RELIILLRMRADALADACLKRLKRSLAQGQRKKAPHLIEVEGIQQRCLHIYHKIYFPDDTVEAFE 1840
            :||::.||.|...::...:.||::::..||||..||.:|||.||.:...|:||:||||||.||||
  Fly  1806 KELLLFLRTRRHPISQDSMHRLQKTIRHGQRKYPPHQVEVEAIQHKTTQIFHKVYFPDDTDEAFE 1870

  Fly  1841 IESHTRGAELIADIAQRLELKSPVGYSIFLKTGDRVYAMPEEEFVFDFITQLIYWLRQQRTIRSI 1905
            ::|.||..:...:|:|||.|::..|:|:|:|..|:|.::||.:|.|||:..|..|:::.|.||..
  Fly  1871 VDSSTRAKDFCNNISQRLSLRTSEGFSLFVKIADKVISVPEGDFFFDFVRHLTDWIKKARPIRDG 1935

  Fly  1906 SDGQ--YQLHFMRKLWLNNHPGEDLNGDMIFSYPQELHKYLKGYYPIDCEQASRLAILVYS---A 1965
            ::.|  ||:.||:|||.|..||:|.|.|:||.|.|||.|.|:||:....|:|::||.||:.   .
  Fly  1936 ANPQFTYQVFFMKKLWTNTVPGKDRNADLIFHYHQELPKLLRGYHKCSREEAAKLAALVFRVRFG 2000

  Fly  1966 DHDVSLQRLPEVLTRLIPEDLIPLQTVAEWRQQILPKVHRD-HLTEDHAKILFLQELSHFACFGS 2029
            ::...||.:|::|..|||.|::.:|:.:||::.|:...::| .:|.:.||:.||:.:..:..|||
  Fly  2001 ENKQELQAIPQMLRELIPSDIMKIQSTSEWKRSIVASYNQDGGMTSEDAKVAFLKIVYRWPTFGS 2065

  Fly  2030 TFFVVKQQNDDALPETLLIAINSTGFHMLDPTTKEILRSYEYSQLGIWSSGKNHFHIRFGNMIGA 2094
            .||.|||..:...||.||||||..|..::.|.||:||.::.::::..||||..:||:..||::..
  Fly  2066 AFFEVKQTTEPNYPEMLLIAINKHGVSLIHPVTKDILVTHPFTRISNWSSGNTYFHMTIGNLVRG 2130

  Fly  2095 SKLLCSTTQGYKMDDLLASYV 2115
            |||||.|:.||||||||.||:
  Fly  2131 SKLLCETSLGYKMDDLLTSYI 2151

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Myo28B1	NP_723294.1	MYSc_Myo7	81..726	CDD:276832	405/646 (63%)
		IQ	765..785	CDD:197470	11/19 (58%)
		Atrophin-1	<820..>946	CDD:460830	32/147 (22%)
		MyTH4	1031..1239	CDD:470587	97/241 (40%)
		FERM1_F1_Myosin-VII	1243..1334	CDD:340612	45/97 (46%)
		B41	1248..1429	CDD:214604	83/191 (43%)
		PH-like	1454..1547	CDD:473070	28/97 (29%)
		MyTH4	1674..1819	CDD:214535	63/147 (43%)
		FERM2_F1_Myosin-VII	1825..1919	CDD:340613	44/95 (46%)
		B41	1827..2032	CDD:214604	88/210 (42%)
		FERM_C2_MyoVII	2028..2121	CDD:270020	45/88 (51%)
ck	NP_523571.1	MYSc_Myo7	77..721	CDD:276832	405/646 (63%)
		MyTH4	<1138..1245	CDD:214535	61/107 (57%)
		FERM1_F1_Myosin-VII	1249..1347	CDD:340612	45/97 (46%)
		B41	1251..1467	CDD:214604	94/225 (42%)
		FERM_C1_MyoVII	1461..1559	CDD:270019	28/97 (29%)
		SH3	1560..1624	CDD:473055	21/65 (32%)
		MyTH4	1701..1849	CDD:214535	63/147 (43%)
		FERM2_F1_Myosin-VII	1854..1951	CDD:340613	44/96 (46%)
		B41	1856..2068	CDD:214604	88/211 (42%)
		FERM_C2_MyoVII	2064..2159	CDD:270020	45/88 (51%)