DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo28B1 and Myo31DF

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_001188784.1 Gene:Myo31DF / 34445 FlyBaseID:FBgn0086347 Length:1011 Species:Drosophila melanogaster


Alignment Length:776 Identity:283/776 - (36%)
Similarity:432/776 - (55%) Gaps:75/776 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 MHITSQEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYR 125
            |.:..:..|:|.:.|..:.....:.||:.|:....||||.|.:.|::|||:.:.||....|:.|:
  Fly     1 MAMQREAGVQDFVLLDQVSMEKFMDNLRKRFQNGSIYTYIGEVCVSMNPYRQMNIYGPETIRKYK 65

  Fly   126 NKSLAELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAISGKHSW---- 186
            .:.|.|..||:|||:|:|::.|::.:::.|::|||||||||||::|:|::|:||::.....    
  Fly    66 GRELFENAPHLFAIADSAYRVLKQRQQDTCILISGESGAGKTEASKIIMKYIAAVTNAQGQNEIE 130

  Fly   187 -IEQQIIEANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRD 250
             ::..:|::|.|:|.||||||.|||||||||||::|.|..:....|..|..|||||||:|.|...
  Fly   131 RVKNVLIQSNAILETFGNAKTNRNDNSSRFGKYMDIEFDYKADPVGGIITNYLLEKSRVVQQQPG 195

  Fly   251 ERNYHIFYCMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFK 315
            |||:|.||.:|.|.:..|..:.:||::: .:||||.||....|..:.|.|...:   |.|.|.|.
  Fly   196 ERNFHSFYQLLRGANDNELRQYELQKET-GKYHYLNQGSMDILTEKSDYKGTCN---AFKTLGFS 256

  Fly   316 PEEVWSILSLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIF 380
            .:||.:|...:||:|||||:.|...|    ....|.:..:|:..|:||.:..:.|:.|||:|.|.
  Fly   257 TDEVQTIWRTIAAVLHLGNVEFQTIE----DELVISNKQHLKSTAKLLQVTETELSTALTKRVIA 317

  Fly   381 VHGEHVTTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETI---NKQVDQPMNS-IGVLDIFGF 441
            ..|..:....:...|..|:||..|::||.:|..|:.|||..|   ..:.....|| ||||||:||
  Fly   318 AGGNVMQKDHNATQAEYGKDALAKAIYDRLFTWIISRINRAILFRGSKTQARFNSVIGVLDIYGF 382

  Fly   442 ENFDNNSFEQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNL 506
            |.||:|||||.||||.||.|||.|:..:.|.||:|||.|.|.|.:||:.:|:.|.||:......:
  Fly   383 EIFDSNSFEQFCINYCNEKLQQLFIELVLKQEQEEYQREGIEWTNIEYFNNKIICDLVEQPHKGI 447

  Fly   507 MSLIDEES-KFPKGTDQTLLEKL------HVQHGNRSIYVKGKTTQTSL-----FGIRHYAGVVM 559
            ::::||.. ...|.||.|||..:      |..:.:|.:    |.|...|     |.|.||||.|:
  Fly   448 IAIMDEACLSVGKVTDDTLLGAMDKNLSKHPHYTSRQL----KPTDKELKHREDFRITHYAGDVI 508

  Fly   560 YNPLGFLEKNRDSFSGDLRTLVQRSTNKYLVDIFPHEMPMD---TAKKQPTLCVKFRNSLDMLMR 621
            ||..||:|||:|:...|.:.|:..|.:..|.:::| |...|   |.|:..|....|:.|:..|:.
  Fly   509 YNINGFIEKNKDTLYQDFKRLLHNSKDANLSEMWP-EGAQDIKKTTKRPLTAGTLFQRSMADLVV 572

  Fly   622 TLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLL 686
            ||.:..|:::||||||:.|....||:|....|:||.|::|..|:||||:..|..|..|:.||:::
  Fly   573 TLLKKEPFYVRCIKPNDLKSSTVFDEERVEHQVRYLGLLENLRVRRAGFVHRQRYDKFLLRYKMI 637

  Fly   687 VPPVGP--------------LEQCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDDA-SLELQ 736
            .....|              :|:   :|.|:           |.:||.||:|:|..... :||.|
  Fly   638 SQYTWPNFRAGSDRDGVRVLIEE---KKFAQ-----------DVKYGHTKIFIRSPRTLFALEHQ 688

  Fly   737 RSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQR---------RKYQVMR 788
            |::::...:..:|:.:|..:.||..|:.:.||..|:.|...:|:.         ||.:.||
  Fly   689 RNEMIPHIVTLLQKRVRGWIVRRNFKKMKAAITIVRAYKAYKLRSYVQELANRLRKAKQMR 749

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 266/713 (37%)
MYSc_Myo7 81..726 CDD:276832 260/682 (38%)
IQ 765..785 CDD:197470 7/28 (25%)
DUF4355 827..>887 CDD:290964
MyTH4 1031..1239 CDD:295320
B41 1248..1429 CDD:214604
FERM_N 1248..>1288 CDD:286467
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo31DFNP_001188784.1 MYSc 6..690 CDD:214580 267/710 (38%)
MYSc_Myo1 21..677 CDD:276829 260/682 (38%)
Myosin_TH1 801..983 CDD:283635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466262
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.