DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Myo95E

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_001027208.1 Gene:Myo95E / 2768680 FlyBaseID:FBgn0039157 Length:1288 Species:Drosophila melanogaster


Alignment Length:1010 Identity:236/1010 - (23%)
Similarity:367/1010 - (36%) Gaps:298/1010 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPH 135
            |.:.|.:|.|.:.:.|:..||.:..||||.|:.:||:|||..:..::...::.|.:|.:.:||||
  Fly     9 DSVLLENLSEDSFINNIHQRYKRDHIYTYIGTSVVALNPYHHISEHSLDNVRNYGDKGIFQLPPH 73

  Fly   136 IFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLA---------------------- 178
            |:.:::.|:|.|:...|:|||:::|||||||||:.|:|:.:|.                      
  Fly    74 IYGLTNLAYQSLKDQSEDQCVLLTGESGAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRKQSSTS 138

  Fly   179 ----------------------------------------------------------------- 178
                                                                             
  Fly   139 SASGLVMHAHRRASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIERQSRRH 203

  Fly   179 -----------------AISG----------------KH-------------------------- 184
                             .|||                ||                          
  Fly   204 MREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSACTAMPAAAKGSPKYAVPTV 268

  Fly   185 ----------------------------------------------------SWIEQQIIEANP- 196
                                                                :.:.|...|:.| 
  Fly   269 YGGCRQCGHSKCVRAQSLEKEERDDLRGSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPE 333

  Fly   197 ----------------------------------------------------------------- 196
                                                                             
  Fly   334 RERDRSSLMGSTQRISLYDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMRECVTC 398

  Fly   197 ---IMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFY 258
               .:||.|||.|::|:||||:||..:|....:|...|..|..|:|||:||......|||:||||
  Fly   399 ADVFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYMLEKTRITDPIIGERNFHIFY 463

  Fly   259 CMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSIL 323
            .:|.|......:.|||. ::..:|..|..    |.....|..:|...:.::.||....||..||.
  Fly   464 QLLLGADLQLLKSLKLY-RNVEKYELLRN----TTAMEEDRMNFHYTKRSLDVLGLSCEESNSIF 523

  Fly   324 SLLAAILHLGNLRFT-ATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQ-RTIFVHGEHV 386
            .::|.:|.|||..|. .|.:......::.:...:|..||||.:....|...||: .:.....|.|
  Fly   524 RVIAVVLKLGNFIFVPITNIDGTEGCQVSNVYEVQETAQLLNMEAQILINCLTRANSTNSAQEDV 588

  Fly   387 TTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQ 451
            ...:....|...|:...::||..:|..:|.:|||::..  .|...::.:||.:|||..|:|||||
  Fly   589 GCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESLKS--TQREKNLALLDFYGFEALDHNSFEQ 651

  Fly   452 LCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKF 516
            ..|||:.|.:.|.||.|:.:.||:.|..|.:.|..|::.||:.|.:||......::|||:|... 
  Fly   652 FAINYSAEKIHQNFVFHVLRSEQELYIREGLEWSRIDYFDNESICELIDKPSYGILSLINEPHL- 715

  Fly   517 PKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLV 581
             ...|..||.......|:.:....|  :.:..|.|||||.||.|:...|||||.|.....:....
  Fly   716 -NSNDALLLRVQQCCAGHPNFMTTG--SNSMCFQIRHYASVVNYSIHRFLEKNSDMLPKYISAAF 777

  Fly   582 QRSTNKYLVDIFPHEMPMDTAKKQP-TLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNF 645
            .:|....:..:||...|.....|:| ||....|..|..|:..:.....:::.||||||.|:|..|
  Fly   778 YQSKLSLVQSLFPEGNPRRQVTKKPSTLSSNIRTQLQTLLAIVKHRRSHYVFCIKPNEGKQPHQF 842

  Fly   646 DKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQ--CDCRKLARQICEV 708
            |..|...|:||..:|....:.|.|:.....:..|..||:||.....|...  .....:|..|..:
  Fly   843 DMALVQHQVRYMSLMPLVHLCRTGHCYHLLHVKFFHRYKLLNSLTWPHFHGGSQVEGIALIIRNL 907

  Fly   709 ALPADSDRQYGKTKLFLRDEDDA-SLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQ 772
            .||: ::...|...:|:|..... .||..|...:.:..|.||...|....|:..:|.|.:.:.:.
  Fly   908 PLPS-AEFTIGTKNVFVRSPRTVYELEQFRRLRISELAVLIQTMFRMYHARKRFQRMRHSQMIIS 971

  Fly   773 RYWRGRLQRR-------------KYQVMRQGFHRL 794
            ..||...:.|             .|:|.|:.:..|
  Fly   972 SAWRTWRECRFGIPFTGRRHLWSLYRVAREEYRSL 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 221/938 (24%)
MYSc_Myo7 81..726 CDD:276832 214/916 (23%)
IQ 765..785 CDD:197470 4/32 (13%)
DUF4355 827..>887 CDD:290964
MyTH4 1031..1239 CDD:295320
B41 1248..1429 CDD:214604
FERM_N 1248..>1288 CDD:286467
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo95ENP_001027208.1 Motor_domain 19..>118 CDD:277568 39/98 (40%)
Motor_domain 403..924 CDD:277568 167/532 (31%)
Myosin_TH1 1092..1267 CDD:283635
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466270
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR13140
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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