DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Myo95E

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_001027208.1 Gene:Myo95E / 2768680 FlyBaseID:FBgn0039157 Length:1288 Species:Drosophila melanogaster


Alignment Length:1010 Identity:236/1010 - (23%)
Similarity:367/1010 - (36%) Gaps:298/1010 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 DMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPH 135
            |.:.|.:|.|.:.:.|:..||.:..||||.|:.:||:|||..:..::...::.|.:|.:.:||||
  Fly     9 DSVLLENLSEDSFINNIHQRYKRDHIYTYIGTSVVALNPYHHISEHSLDNVRNYGDKGIFQLPPH 73

  Fly   136 IFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLA---------------------- 178
            |:.:::.|:|.|:...|:|||:::|||||||||:.|:|:.:|.                      
  Fly    74 IYGLTNLAYQSLKDQSEDQCVLLTGESGAGKTETFKMIVNFLTHIQDRSHCPPTPNVLRKQSSTS 138

  Fly   179 ----------------------------------------------------------------- 178
                                                                             
  Fly   139 SASGLVMHAHRRASSSCSGTANFIICKNRAENPSGSVSRRQSPSPGPSQRSRTRAESIERQSRRH 203

  Fly   179 -----------------AISG----------------KH-------------------------- 184
                             .|||                ||                          
  Fly   204 MREKIVDFDFSHHKSSENISGLPESHAHHMHPTKSCFKHQQTQVSACTAMPAAAKGSPKYAVPTV 268

  Fly   185 ----------------------------------------------------SWIEQQIIEANP- 196
                                                                :.:.|...|:.| 
  Fly   269 YGGCRQCGHSKCVRAQSLEKEERDDLRGSNCRLSTIATATTNPAHPHRGSCSNLMRQHSTESQPE 333

  Fly   197 ----------------------------------------------------------------- 196
                                                                             
  Fly   334 RERDRSSLMGSTQRISLYDAHKLSKVLGDLPPPPPSSVSPTPSASSSLHRRHKSPTQRMRECVTC 398

  Fly   197 ---IMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFY 258
               .:||.|||.|::|:||||:||..:|....:|...|..|..|:|||:||......|||:||||
  Fly   399 ADVFLEAMGNACTLKNNNSSRYGKLFDIEIDFKGDPMGVHITHYMLEKTRITDPIIGERNFHIFY 463

  Fly   259 CMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSIL 323
            .:|.|......:.|||. ::..:|..|..    |.....|..:|...:.::.||....||..||.
  Fly   464 QLLLGADLQLLKSLKLY-RNVEKYELLRN----TTAMEEDRMNFHYTKRSLDVLGLSCEESNSIF 523

  Fly   324 SLLAAILHLGNLRFT-ATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQ-RTIFVHGEHV 386
            .::|.:|.|||..|. .|.:......::.:...:|..||||.:....|...||: .:.....|.|
  Fly   524 RVIAVVLKLGNFIFVPITNIDGTEGCQVSNVYEVQETAQLLNMEAQILINCLTRANSTNSAQEDV 588

  Fly   387 TTSLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETINKQVDQPMNSIGVLDIFGFENFDNNSFEQ 451
            ...:....|...|:...::||..:|..:|.:|||::..  .|...::.:||.:|||..|:|||||
  Fly   589 GCEMDARQAATNRNTLCRTLYSRLFTWLVNKINESLKS--TQREKNLALLDFYGFEALDHNSFEQ 651

  Fly   452 LCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKF 516
            ..|||:.|.:.|.||.|:.:.||:.|..|.:.|..|::.||:.|.:||......::|||:|... 
  Fly   652 FAINYSAEKIHQNFVFHVLRSEQELYIREGLEWSRIDYFDNESICELIDKPSYGILSLINEPHL- 715

  Fly   517 PKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLV 581
             ...|..||.......|:.:....|  :.:..|.|||||.||.|:...|||||.|.....:....
  Fly   716 -NSNDALLLRVQQCCAGHPNFMTTG--SNSMCFQIRHYASVVNYSIHRFLEKNSDMLPKYISAAF 777

  Fly   582 QRSTNKYLVDIFPHEMPMDTAKKQP-TLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNF 645
            .:|....:..:||...|.....|:| ||....|..|..|:..:.....:::.||||||.|:|..|
  Fly   778 YQSKLSLVQSLFPEGNPRRQVTKKPSTLSSNIRTQLQTLLAIVKHRRSHYVFCIKPNEGKQPHQF 842

  Fly   646 DKELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQ--CDCRKLARQICEV 708
            |..|...|:||..:|....:.|.|:.....:..|..||:||.....|...  .....:|..|..:
  Fly   843 DMALVQHQVRYMSLMPLVHLCRTGHCYHLLHVKFFHRYKLLNSLTWPHFHGGSQVEGIALIIRNL 907

  Fly   709 ALPADSDRQYGKTKLFLRDEDDA-SLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQ 772
            .||: ::...|...:|:|..... .||..|...:.:..|.||...|....|:..:|.|.:.:.:.
  Fly   908 PLPS-AEFTIGTKNVFVRSPRTVYELEQFRRLRISELAVLIQTMFRMYHARKRFQRMRHSQMIIS 971

  Fly   773 RYWRGRLQRR-------------KYQVMRQGFHRL 794
            ..||...:.|             .|:|.|:.:..|
  Fly   972 SAWRTWRECRFGIPFTGRRHLWSLYRVAREEYRSL 1006

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 214/916 (23%)
IQ 765..785 CDD:197470 4/32 (13%)
Atrophin-1 <820..>946 CDD:460830
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo95ENP_001027208.1 Motor_domain 3..>123 CDD:473979 43/113 (38%)
Motor_domain <403..937 CDD:473979 170/545 (31%)
Myosin_TH1 1092..1288 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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