DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Myo1g

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_006514763.1 Gene:Myo1g / 246177 MGIID:1927091 Length:1039 Species:Mus musculus


Alignment Length:755 Identity:274/755 - (36%)
Similarity:406/755 - (53%) Gaps:77/755 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 RYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKENQ 154
            ::.|..||||.|.:||::||||.||:|....|..|:.:.|.|.|||::|:::.|::.::|...:.
Mouse    53 KFEKGRIYTYIGEVLVSVNPYQELPLYGPEAIAKYQGRELYERPPHLYAVANAAYKAMKRRSRDT 117

  Fly   155 CVVISGESGAGKTESTKLILQYLAAISGKHSWIEQQ-----IIEANPIMEAFGNAKTVRNDNSSR 214
            |:||||||||||||::|.|:||:||::......|.:     ::::..::||||||:|.||.||||
Mouse   118 CIVISGESGAGKTEASKHIMQYIAAVTNPSQRAEVERVKNVLLKSTCVLEAFGNARTNRNHNSSR 182

  Fly   215 FGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAERERLKLQEQSP 279
            ||||::|.|..:|...|..|..|||||||::.|...|||:|.||.:|.|....|.:.|.| |::|
Mouse   183 FGKYMDINFDFKGDPVGGHIHSYLLEKSRVLKQHVGERNFHAFYQLLRGSEDQELQGLHL-ERNP 246

  Fly   280 SQYHYLAQGGCFTLPGR----GDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLRFTAT 340
            :.|::..||....:...    .|.|....:..||:::.|.|:||.||..:|||||||||:.|..|
Mouse   247 AVYNFTRQGAGLNMGVHNALDSDEKSHQGVMEAMRIIGFSPDEVESIHRILAAILHLGNIEFVET 311

  Fly   341 EV--ANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHG-EHVTTSLSKEAAIEGRDAF 402
            |.  ......|:.|...:..||:|...|...:...|..||:...| |.:..|.:...|...|||.
Mouse   312 EENGPQKGGLEVADEALVGYVAKLTATPRDLVLRTLLARTVASGGREVIEKSHTVAEASYARDAC 376

  Fly   403 VKSLYDGIFVRIVRRINETINKQVDQPM-----NSIGVLDIFGFENFDNNSFEQLCINYANENLQ 462
            .|::|..:|..:|.:||..:..:...|.     ..||||||:|||.|..|||||.||||.||.||
Mouse   377 AKAMYQRLFEWVVNKINSIMEPRNRDPRCDGKDTVIGVLDIYGFEVFPVNSFEQFCINYCNEKLQ 441

  Fly   463 QFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEE-SKFPKGTDQTLLE 526
            |.|:..|.|.||:||:.|.|.||.||:.:|..|::|:......:::::||. |.....||:..|:
Mouse   442 QLFIQLILKQEQEEYEREGIAWQTIEYFNNATIVELVEQPHRGILAVLDEACSTAGPITDRIFLQ 506

  Fly   527 KLHVQHGNRSIYVKGK---TTQTSLFG----IRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRS 584
            .|...|.:...|...:   |.:|..||    |:||||.|.|:..||::|||||...|.:.|:..|
Mouse   507 TLDTHHRHHPHYSSRQLCPTDKTMEFGRDFQIKHYAGDVTYSVEGFIDKNRDSLFQDFKRLLYNS 571

  Fly   585 TNKYLVDIFPH-EMPMDTAKKQP-TLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDK 647
            .:..|..::|. :..:....|:| |....|:||:..|:..|:...|:::|||||||.|.....|:
Mouse   572 VDPTLRAMWPDGQQDITEVTKRPLTAGTLFKNSMVALVENLASKEPFYVRCIKPNEDKVAGRLDE 636

  Fly   648 ELCVRQLRYSGMMETARIRRAGYPIRHAYRAFVERYRLLVPPVGPLEQCDCRKLARQICEVALP- 711
            ..|..|:.|.|::|..|:||||:..|..|..|:.||::                   .||...| 
Mouse   637 AHCRHQVEYLGLLENVRVRRAGFASRQPYPRFLLRYKM-------------------TCEYTWPN 682

  Fly   712 --ADSDRQ----------------YGKTKLFLRDEDD-ASLELQRSQLMLKSIVTIQRGIRRVLF 757
              ..|||.                :|.:|||:|.... .:||..|::|:...::.:|:..|..|.
Mouse   683 HLLGSDRDAVSALLEQHGLQGDVAFGHSKLFIRSPRTLVTLEQSRARLIPIIVLLLQKAWRGTLA 747

  Fly   758 RRYMKRYREAIITVQRYWRG--------RLQRRKYQVMRQ 789
            |.:.:|.| ||.|:.|::|.        .|||| :|..||
Mouse   748 RWHCRRLR-AIYTIMRWFRRHKVRAHLIELQRR-FQAARQ 785

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 251/681 (37%)
IQ 765..785 CDD:197470 10/27 (37%)
Atrophin-1 <820..>946 CDD:460830
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo1gXP_006514763.1 MYSc_Myo1 52..715 CDD:276829 251/681 (37%)
Myosin_TH1 836..1007 CDD:461801
Blue background indicates that the domain is not in the aligned region.

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