DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Plekhh3

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_666142.1 Gene:Plekhh3 / 217198 MGIID:2384950 Length:796 Species:Mus musculus


Alignment Length:612 Identity:124/612 - (20%)
Similarity:225/612 - (36%) Gaps:124/612 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1600 GQWGQFLAG---NVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFR 1661
            |.|...::|   ::|:.:.....:|:....|||....:.|..||            :||.....:
Mouse   164 GLWSVTVSGRKHSIRLCSPRQAEAERWGVALREVIASKAPLETP------------TQLLLRDIQ 216

  Fly  1662 EPLDSDKA--------PLSKFSPEPLKAPLLKAVVKV-------PPLFQQALVMHHHI-----LK 1706
            |.....:|        |:.:.:...|.||||....:|       .||.::|:.:...:     .:
Mouse   217 ESCGDPEAVALIYRRNPILRHTSSALYAPLLPLPYEVSAPGPGYAPLREEAVRLFLALQALEGAR 281

  Fly  1707 YMGDIARSNLPVNTDLIFQPALQHPLLCDELYCQLMKQLSDN------PSSE--SEKRGWDLLYL 1763
            ..|.:.:..|....||   ||||     |||:.||.||.|..      |:::  :..|.|.||..
Mouse   282 RPGPLMQGVLQTCRDL---PALQ-----DELFLQLAKQTSGPAGPPGLPATQDPATLRYWQLLTC 338

  Fly  1764 ATGLVAPSVLVMRELIILLRMRADALADACLKRLKRSL--AQGQ---RKKAPHLIEVEGIQQRCL 1823
            .:....|...|...|:..|.....||.|:.|....|.:  |.|:   |:..|.|.|:..:.:| .
Mouse   339 MSCTFRPGGAVRGHLLGHLERTEQALPDSELAEYARFIRKALGRTRGRELVPSLAEISALSRR-Q 402

  Fly  1824 HIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLEL-KSPVGYSIFLKTGDRVYAMPEEEFVFD 1887
            .:...::.|........|:|||...|:..::..||.| :|...::::.:.|.:..|:.....|.|
Mouse   403 ELLCTVHCPGAGACPVSIDSHTTAGEVARELVGRLGLARSRNAFALYEQRGAQERALAGGTLVAD 467

  Fly  1888 FITQLIYWLRQQRTIRSISDGQYQLHFMRKLWLNNHPGEDLN---GDMIFSYPQELHKYLKGYYP 1949
            .:|:......::..:....|..::|  ..:|....|| |.|:   .::.|.:.|.....|:|..|
Mouse   468 VLTRFENLTSEEAGLEDSPDCGWRL--CLRLHGPLHP-EGLSPEGHELPFLFEQAHALLLRGRPP 529

  Fly  1950 IDCEQASRLAIL-VYSADHDVSLQRLPEVLTRLIPEDLIP----------------LQTVAEWRQ 1997
            ...:....||.| :.|...|.|.:....:|.||:|..:.|                |...|.|..
Mouse   530 PPEDTLRALAALRLQSLHRDFSPRGPLPLLDRLLPPPIPPREQPPCPTRRPPPSAALLAGALWSP 594

  Fly  1998 QILP-KVHRDH----------------------------------LTEDHAKILFLQELSHFACF 2027
            .:.. :..|..                                  :.:..|...:|...:....|
Mouse   595 GLAKRRAERARRGGTGRSTGSTAQVGGGGASTTAAVLGGWKRLRGMGQAEAMAAYLALAAQCPGF 659

  Fly  2028 GSTFFVVKQQNDD---ALPETLLIAINSTGFHMLDPTTKEILRSYEYSQLGIWS-SGKNHFHIRF 2088
            |:..:.|.:.:.:   ..|:.|.:.:.:....:..|...|.:.|..|..:.... .|.:...:| 
Mouse   660 GAARYDVLELSTEPGGGAPQKLCLGLGAKAMSLSRPGETEPIHSVSYGHVAACQLIGPHTLALR- 723

  Fly  2089 GNMIGASKLLCSTTQGYKMDDLLASYV 2115
               :|.|:||..:.|..::.:|:.:|:
Mouse   724 ---VGDSQLLLQSPQVEEIMELVNAYL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832
IQ 765..785 CDD:197470
Atrophin-1 <820..>946 CDD:460830
MyTH4 1031..1239 CDD:470587
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535 45/169 (27%)
FERM2_F1_Myosin-VII 1825..1919 CDD:340613 17/94 (18%)
B41 1827..2032 CDD:214604 46/260 (18%)
FERM_C2_MyoVII 2028..2121 CDD:270020 17/92 (18%)
Plekhh3NP_666142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..71
PH-like 84..208 CDD:473070 11/55 (20%)
MyTH4 288..397 CDD:459939 35/116 (30%)
Ubl1_cv_Nsp3_N-like 401..500 CDD:475130 19/101 (19%)
FERM_M 514..>552 CDD:459788 10/37 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..584 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..625 1/26 (4%)
PH-like 660..747 CDD:473070 16/90 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 750..796
Blue background indicates that the domain is not in the aligned region.

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