DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and Plekhh3

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:NP_666142.1 Gene:Plekhh3 / 217198 MGIID:2384950 Length:796 Species:Mus musculus


Alignment Length:612 Identity:124/612 - (20%)
Similarity:225/612 - (36%) Gaps:124/612 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1600 GQWGQFLAG---NVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRRRQHNISQLAESHFR 1661
            |.|...::|   ::|:.:.....:|:....|||....:.|..||            :||.....:
Mouse   164 GLWSVTVSGRKHSIRLCSPRQAEAERWGVALREVIASKAPLETP------------TQLLLRDIQ 216

  Fly  1662 EPLDSDKA--------PLSKFSPEPLKAPLLKAVVKV-------PPLFQQALVMHHHI-----LK 1706
            |.....:|        |:.:.:...|.||||....:|       .||.::|:.:...:     .:
Mouse   217 ESCGDPEAVALIYRRNPILRHTSSALYAPLLPLPYEVSAPGPGYAPLREEAVRLFLALQALEGAR 281

  Fly  1707 YMGDIARSNLPVNTDLIFQPALQHPLLCDELYCQLMKQLSDN------PSSE--SEKRGWDLLYL 1763
            ..|.:.:..|....||   ||||     |||:.||.||.|..      |:::  :..|.|.||..
Mouse   282 RPGPLMQGVLQTCRDL---PALQ-----DELFLQLAKQTSGPAGPPGLPATQDPATLRYWQLLTC 338

  Fly  1764 ATGLVAPSVLVMRELIILLRMRADALADACLKRLKRSL--AQGQ---RKKAPHLIEVEGIQQRCL 1823
            .:....|...|...|:..|.....||.|:.|....|.:  |.|:   |:..|.|.|:..:.:| .
Mouse   339 MSCTFRPGGAVRGHLLGHLERTEQALPDSELAEYARFIRKALGRTRGRELVPSLAEISALSRR-Q 402

  Fly  1824 HIYHKIYFPDDTVEAFEIESHTRGAELIADIAQRLEL-KSPVGYSIFLKTGDRVYAMPEEEFVFD 1887
            .:...::.|........|:|||...|:..::..||.| :|...::::.:.|.:..|:.....|.|
Mouse   403 ELLCTVHCPGAGACPVSIDSHTTAGEVARELVGRLGLARSRNAFALYEQRGAQERALAGGTLVAD 467

  Fly  1888 FITQLIYWLRQQRTIRSISDGQYQLHFMRKLWLNNHPGEDLN---GDMIFSYPQELHKYLKGYYP 1949
            .:|:......::..:....|..::|  ..:|....|| |.|:   .::.|.:.|.....|:|..|
Mouse   468 VLTRFENLTSEEAGLEDSPDCGWRL--CLRLHGPLHP-EGLSPEGHELPFLFEQAHALLLRGRPP 529

  Fly  1950 IDCEQASRLAIL-VYSADHDVSLQRLPEVLTRLIPEDLIP----------------LQTVAEWRQ 1997
            ...:....||.| :.|...|.|.:....:|.||:|..:.|                |...|.|..
Mouse   530 PPEDTLRALAALRLQSLHRDFSPRGPLPLLDRLLPPPIPPREQPPCPTRRPPPSAALLAGALWSP 594

  Fly  1998 QILP-KVHRDH----------------------------------LTEDHAKILFLQELSHFACF 2027
            .:.. :..|..                                  :.:..|...:|...:....|
Mouse   595 GLAKRRAERARRGGTGRSTGSTAQVGGGGASTTAAVLGGWKRLRGMGQAEAMAAYLALAAQCPGF 659

  Fly  2028 GSTFFVVKQQNDD---ALPETLLIAINSTGFHMLDPTTKEILRSYEYSQLGIWS-SGKNHFHIRF 2088
            |:..:.|.:.:.:   ..|:.|.:.:.:....:..|...|.:.|..|..:.... .|.:...:| 
Mouse   660 GAARYDVLELSTEPGGGAPQKLCLGLGAKAMSLSRPGETEPIHSVSYGHVAACQLIGPHTLALR- 723

  Fly  2089 GNMIGASKLLCSTTQGYKMDDLLASYV 2115
               :|.|:||..:.|..::.:|:.:|:
Mouse   724 ---VGDSQLLLQSPQVEEIMELVNAYL 747

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580
MYSc_Myo7 81..726 CDD:276832
IQ 765..785 CDD:197470
DUF4355 827..>887 CDD:290964
MyTH4 1031..1239 CDD:295320
B41 1248..1429 CDD:214604
FERM_N 1248..>1288 CDD:286467
FERM_B-lobe 1342..1429 CDD:271216
PH-like 1454..1547 CDD:302622
MyTH4 1674..1819 CDD:214535 45/169 (27%)
B41 1827..2032 CDD:214604 46/260 (18%)
FERM_N 1829..>1877 CDD:286467 11/48 (23%)
FERM_M 1936..2032 CDD:278785 23/147 (16%)
FERM_C2_MyoVII 2028..2121 CDD:270020 17/92 (18%)
Plekhh3NP_666142.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 28..71
PH-like 84..208 CDD:302622 11/55 (20%)
PH 96..199 CDD:278594 8/34 (24%)
MyTH4 288..397 CDD:279165 35/116 (30%)
UBQ 409..>459 CDD:294102 11/49 (22%)
FERM_B-lobe 514..>553 CDD:298919 11/38 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 557..584 5/26 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 598..625 1/26 (4%)
PH-like 660..747 CDD:302622 16/90 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 750..796
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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