DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myo28B1 and Myo9b

DIOPT Version :9

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_006509629.1 Gene:Myo9b / 17925 MGIID:106624 Length:2164 Species:Mus musculus


Alignment Length:2241 Identity:554/2241 - (24%)
Similarity:834/2241 - (37%) Gaps:789/2241 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 QEDVEDMITLGDLQEYTILRNLQNRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLA 130
            |.|.:|:..|.:|.|..:|:||:.|:.:|.||||.||:||||||::.||||..:.:::|.|:.|.
Mouse   145 QADFDDLCNLPELTEANLLQNLKLRFMQQKIYTYAGSILVAINPFKFLPIYNPKYVKMYENQQLG 209

  Fly   131 ELPPHIFAISDNAFQRLQRLKENQCVVISGESGAGKTESTKLILQYLAAIS--GKHSWIEQQIIE 193
            :|.||:||::|.|:..:.|...|||:|||||||:|||:||..::..|.|:|  |..|.:|:.|:.
Mouse   210 KLEPHVFALADVAYYAMLRKHVNQCIVISGESGSGKTQSTNFLIHCLTALSQKGYASGVERTILG 274

  Fly   194 ANPIMEAFGNAKTVRNDNSSRFGKYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFY 258
            |.|::||||||||..|:|||||||:|::.:...|.::||.:::|||||||:|.|.:||||||:||
Mouse   275 AGPVLEAFGNAKTAHNNNSSRFGKFIQVNYLENGIVRGAVVEKYLLEKSRLVSQEKDERNYHVFY 339

  Fly   259 CMLAGLSTAERERLKLQEQSPSQYHYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSIL 323
            .:|.|:|  |.|||:.|.:.|..|.||.|.......|.....||..::.||:::.|.|.....|.
Mouse   340 YLLLGVS--EEERLEFQLKQPQDYFYLNQHNLNIEDGEDLKHDFERLQQAMEMVGFLPATKKQIF 402

  Fly   324 SLLAAILHLGNLRFTATEVANLATAEIDDTPNLQRVAQLLGIPISALNAALTQRTIFVHGEHVTT 388
            |:|:|||:|||:.:...........|:.....|..::|||.:....|...||:|......:.:..
Mouse   403 SVLSAILYLGNVTYKKRATGRDEGLEVGPPEVLDTLSQLLKVKRETLVEVLTKRKTVTVNDKLIL 467

  Fly   389 SLSKEAAIEGRDAFVKSLYDGIFVRIVRRINETI--NKQVDQPMN--SIGVLDIFGFENFDNNSF 449
            ..|...||..||:..||||..:|..||.|||..:  .|.:::.::  |||||||||||:|:.|||
Mouse   468 PYSLSEAITARDSMAKSLYSALFDWIVLRINHALLNKKDMEEAVSCLSIGVLDIFGFEDFERNSF 532

  Fly   450 EQLCINYANENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEES 514
            ||.|||||||.||.:|..||||:||:|||.|.|:|.:|::.||...:.||..||..|..|:||||
Mouse   533 EQFCINYANEQLQYYFTQHIFKLEQEEYQGEGISWHNIDYTDNVGCIHLISKKPTGLFYLLDEES 597

  Fly   515 KFPKGTDQTLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRT 579
            .||..|..|||.|...||.:.. |..|.......|.|:|:||.|.|....|.|||.|....|:..
Mouse   598 NFPHATSHTLLAKFKQQHEDNK-YFLGTPVLEPAFIIQHFAGRVKYQIKDFREKNMDYMRPDIVA 661

  Fly   580 LVQRSTNKY---LVDIFP----------------------------------------------H 595
            |::.|.:.|   |:.:.|                                              .
Mouse   662 LLRGSDSSYVRQLIGMDPVAVFRWAVLRAAIRAMAVLREAGRLRAERAEKAAAGISSPATRSHME 726

  Fly   596 EMP-------------------------------------------------------------- 598
            |:|                                                              
Mouse   727 ELPRGASTPSEKLYRCTGLDFSFERSEELDVNAFEDIMAFYESRKARGQSDLHNQIIKSLKGLPW 791

  Fly   599 --------------------------------------------------------------MDT 601
                                                                          :..
Mouse   792 QGEDPRRLLQSLSLFQKPRTSFLKSKGIKQKQIIPKNLLDSKSLRLIISMTLHDRTTKSLLHLHK 856

  Fly   602 AKKQPTLCVKFRNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIR 666
            .||.|::..:|:.||:.|:..|.:|.|:|||||:.|..|:...||.||.::||||:||:||.|||
Mouse   857 KKKPPSISAQFQTSLNKLLEALGKAEPFFIRCIRSNAEKKELCFDDELVLQQLRYTGMLETVRIR 921

  Fly   667 RAGYPIRHAYRAFVERYRLLVP-PVGPLEQCDCRKLARQICEVALPADSDRQYGKTKLFLRDEDD 730
            |:||..::.::.|.|::::|:| .|.|     ||:....:.|.......:.|.||||:||::.:.
Mouse   922 RSGYSAKYTFQDFTEQFQVLLPKDVQP-----CREAIAALLEKLQVDRQNYQIGKTKVFLKETER 981

  Fly   731 ASLELQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQ---------- 785
            .:|:.:....:|:.|:.:|...|.||.|::..:.:.|.:|:|..||....||..:          
Mouse   982 QTLQEKLHGEVLRRILQLQSWFRMVLERKHFVQMKHAALTIQACWRSYRVRRALERTQAAVYLQA 1046

  Fly   786 -----VMRQGFHRLGACIAAQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQKKLLERRKQNQLKK 845
                 :.||.:|.                .|...|:||:|.||:|.|:.|.:.:.|::|..|.::
Mouse  1047 AWRGYLQRQAYHH----------------QRHSIIRLQSLCRGHLQRRSFSQMVSEKQKAEQARE 1095

  Fly   846 -----------------EELLK-----------------------LAKMKE-------------- 856
                             |:|.:                       ::..||              
Mouse  1096 AAGGKLSEGEPGPVAAGEQLSEHPVEDPESLGVEAETWMNKSPDGMSPKKETPSPEMETAAQKTV 1160

  Fly   857 -AEELLRLQQLKEQKE-REQR-----EQQEKRLQ---EEQRLKAEAAARNALAMAAVQQKRRTKP 911
             ||...::...:|::| |.||     |:|.|.:|   ||.....|.:.|.:|.:.      .:.|
Mouse  1161 PAESHEKVSSSREKRESRRQRGLEHVERQNKHIQSCREESSTHREPSRRASLEIG------ESFP 1219

  Fly   912 VKQEAPKAPTLQA--RNSLP-----------PP--------PTTLIV---AAPL---------PT 943
            ...:.|:...|:|  ..:.|           ||        ||||.:   .:|:         |.
Mouse  1220 EGTKGPREDGLEAWTETTAPSSSKQAQVVGDPPGSPSPVQRPTTLALDSRVSPMLPSSSLEVSPV 1284

  Fly   944 RPASAV------------TRINTIPESPG------------------TIDVESSKQMVDDVFRFL 978
            .|:|::            |:....||||.                  .:::...|::...|   |
Mouse  1285 LPSSSLESPKDKDKDESSTKAQDKPESPSGSTQIQRYQHPDTERLATAVEIWRGKKLASAV---L 1346

  Fly   979 NDEPD---------AAL-----RKLNNISSGDTIRLPKSVPNNIDTS-----DFSYLK------- 1017
            :...|         |||     |:: :.|:.|..:|.   |..:.||     |||..|       
Mouse  1347 SQSLDLSEKHRATGAALTPTEERRI-SFSTSDVSKLS---PVKVQTSAEIDGDFSSKKPSIHKKK 1407

  Fly  1018 -----------------------------------------YAATYFGGGATAQHE--------- 1032
                                                     ...|...||..||..         
Mouse  1408 SGDPSAGPDAGLSPGSQGDSKSAFKRLFLHKAKDKKPSLEGVEETESNGGQAAQETPARKTLDVP 1472

  Fly  1033 ----------RKPLK-------------------------------------------KSLLKHE 1044
                      .||||                                           ..|...:
Mouse  1473 SSQQHRHTTGEKPLKGKKNRNRKVGQITVSEKWRESVFRKITNANELKFLDEFLLNKVNDLRSQK 1537

  Fly  1045 HPIDEMASKAIWLTILRFMGDLPDVVSSPT--LHV-----FDN-ENLMSDLA------------- 1088
            .||:.:..:|    ..||..::..:.|.|.  :||     .:| :.::|:||             
Mouse  1538 TPIESLFIEA----TERFRSNIKTMYSVPNGKIHVGYKDLMENYQIVVSNLAAERGEKDTNLVLN 1598

  Fly  1089 ---SLLNT-SDSYKPRLFVRQSQRRIPKPLASGEKEAQE-----FYQHWLNVPTSHLEKIHFIIG 1144
               |||:. :.||....|.|..|.:..|.....|:..||     |..:.:|:|.|..:.:.:|  
Mouse  1599 VFQSLLDEFTRSYNKTDFERAKQSKAQKKKRKQERAVQEHNGHVFASYQVNIPQSCEQCLSYI-- 1661

  Fly  1145 HGIIKNSLRDE-ILAQICKQL--------------YLNPSRSSYSRGWLLLSLCLSCFPPSKEFE 1194
                  .|.|: :|..:||..              |....:|..........:|:......|...
Mouse  1662 ------WLMDKALLCSVCKMTCHKKCVHKIQSYCSYTGRRKSELGAEPGHFGVCVDSLTSDKASV 1720

  Fly  1195 P--------HLRS--------FMKQGTAQ--------LQATPSLQRLERTLVNGPRCQPPSLFEL 1235
            |        |:..        :.|.|.|.        ||..|:..:||.             |.:
Mouse  1721 PIVLEKLLEHVEMHGLYTEGLYRKSGAANRTRELRQALQTDPAAVKLED-------------FPI 1772

  Fly  1236 HAIRGRHPLRLDIHLMDGQQRRLQVDAASTAREAVNQLCQGMGLTDTFGFGLVMSLNGKLMPLGA 1300
            |||.|                        ..::.:.:|.:.:.....:|..|      :.:.|..
Mouse  1773 HAITG------------------------VLKQWLRELPEPLMTFAQYGDFL------RAVELPE 1807

  Fly  1301 GQEH------VLDAISECEQRQLDAPWKLYIRKEMFATWYDPS-MDPKATQLIYKQILNGLKCGE 1358
            .||.      |||.:.|.....|:   :|.......|...|.: |.|.|..:|:...|  |:|.:
Mouse  1808 KQEQLSAIYAVLDHLPEANHTSLE---RLIFHLVKVALLEDVNRMSPGALAIIFAPCL--LRCPD 1867

  Fly  1359 YR--CRSEKDIAMVCALACFVEYGPGEILRLKPSEITAFVPSDLLAPGERAIENWSRLIAATYEK 1421
            ..  ..|.||:.                      :||..|               ..||.....|
Mouse  1868 NSDPLTSMKDVL----------------------KITTCV---------------EMLIKEQMRK 1895

  Fly  1422 SSYVKEEQNDLLLEAQKRAKEDICLFAHLS-------WPMR--HSRLFEVVRKEGPK---LQSDE 1474
            .....||.|.|      .|.|.|. |..||       ||::  .|..:|.||.:.|:   :|..|
Mouse  1896 YKMKMEEINHL------EAAESIA-FRRLSLLRQNAPWPLKLGFSSPYEGVRIKSPRTPVVQDLE 1953

  Fly  1475 L-MLGINSAGLFLIDETEQVLASCCFSEVLKVHVESDDKLHVMTFQHVNFVLQCSSAQDANEVIN 1538
            | .|...:||   .||..:       .|:|...::                    |.::..|.|.
Mouse  1954 LGALPEEAAG---GDEDRE-------KEILMERIQ--------------------SIKEEKEDIT 1988

  Fly  1539 YMLDNLRQRSSYGVALDPVVEGDLEDCLVLNPGDLIEFEAGVTGAQLMAGNAQDCYRGCVNGQWG 1603
            |.|..|..|.|....||.......|        .|:| |.||              ||.|.|...
Mouse  1989 YRLPELDPRGSDEENLDSETSASTE--------SLLE-ERGV--------------RGAVEGPPA 2030

  Fly  1604 QFLAGNVRVLATLTKPSEKLQDILREGRFQEPPKPTPRANYSRR----RQHNISQLAESHFREPL 1664
            ..|.  ..:..||:...|.          ..||:..|.:..:.|    |:..|.         |:
Mouse  2031 PALP--CPISPTLSPLPEA----------AAPPRGRPTSFVTVRVKTPRRTPIM---------PM 2074

  Fly  1665 DSDKAP------LSKFSPEPLKAPLLKAVVKV----PPLFQQALVMHHHILKYMGDIARSNLPVN 1719
            .:.|.|      |:.::|     .|.:|||.|    ||..:|..|  |.:....|    ::||..
Mouse  2075 ANIKLPPGLPLHLTSWAP-----ALQEAVVPVKRREPPARRQDQV--HSVYIAPG----ADLPSQ 2128

  Fly  1720 TDLIFQPALQHPLLCDELYCQLMKQLSDNPS 1750
            :.||   ||.|    |.:.....::.||.|:
Mouse  2129 STLI---ALDH----DTILPGTKRRYSDPPT 2152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc 62..737 CDD:214580 288/850 (34%)
MYSc_Myo7 81..726 CDD:276832 280/824 (34%)
IQ 765..785 CDD:197470 7/19 (37%)
DUF4355 827..>887 CDD:290964 22/123 (18%)
MyTH4 1031..1239 CDD:295320 57/338 (17%)
B41 1248..1429 CDD:214604 31/189 (16%)
FERM_N 1248..>1288 CDD:286467 2/39 (5%)
FERM_B-lobe 1342..1429 CDD:271216 15/88 (17%)
PH-like 1454..1547 CDD:302622 21/98 (21%)
MyTH4 1674..1819 CDD:214535 23/81 (28%)
B41 1827..2032 CDD:214604
FERM_N 1829..>1877 CDD:286467
FERM_M 1936..2032 CDD:278785
FERM_C2_MyoVII 2028..2121 CDD:270020
Myo9bXP_006509629.1 RA_Myosin-IXb 16..112 CDD:340737
MYSc_Myo9 160..977 CDD:276836 280/824 (34%)
IQ 1014..1035 CDD:197470 7/20 (35%)
IQ 1036..1058 CDD:197470 2/21 (10%)
DUF4045 1207..>1495 CDD:372533 49/300 (16%)
C1 1641..1689 CDD:237996 10/55 (18%)
RhoGAP_myosin_IXB 1706..1891 CDD:239872 46/269 (17%)
PHA02682 <2029..>2123 CDD:177464 26/125 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4229
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.900

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