DRSC/TRiP Functional Genomics Resources

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Protein Alignment Myo28B1 and MYO3B

DIOPT Version :10

Sequence 1:NP_723294.1 Gene:Myo28B1 / 53515 FlyBaseID:FBgn0040299 Length:2122 Species:Drosophila melanogaster
Sequence 2:XP_011508956.1 Gene:MYO3B / 140469 HGNCID:15576 Length:1386 Species:Homo sapiens


Alignment Length:1140 Identity:352/1140 - (30%)
Similarity:540/1140 - (47%) Gaps:239/1140 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 ARIVRTEKTQTLVCDDRNKQFWVPAGDVLKAMHITSQEDVE------DMITLGDLQEYTILRNLQ 88
            |::::.:|.|..|...|:::.     ...:..|:   ||.|      |::.|..|.|.||:..||
Human   317 AKVLQDQKHQNPVAKTRHERM-----HTRRPYHV---EDAEKYCLEDDLVNLEVLDEDTIIHQLQ 373

  Fly    89 NRYAKQLIYTYTGSMLVAINPYQILPIYTNREIQLYRNKSLAELPPHIFAISDNAFQRLQRLKEN 153
            .|||..|||||.|.:|:|:||:|.|.||:.:..:||.....|..||||||.:|.|:|.:..|.::
Human   374 KRYADLLIYTYVGDILIALNPFQNLSIYSPQFSRLYHGVKRASNPPHIFASADAAYQCMVTLSKD 438

  Fly   154 QCVVISGESGAGKTESTKLILQYLAAISGK--HSWIEQQIIEANPIMEAFGNAKTVRNDNSSRFG 216
            ||:|||||||:|||||..||:|:|..: ||  :..:.::|::.|.::|||||:.|..||||||||
Human   439 QCIVISGESGSGKTESAHLIVQHLTFL-GKANNQTLREKILQVNSLVEAFGNSCTAINDNSSRFG 502

  Fly   217 KYIEIRFTPQGAIQGARIQQYLLEKSRIVFQSRDERNYHIFYCMLAGLSTAER-ERLKLQEQSPS 280
            ||:|:.|||.|.:.||||.:|||||||::.|:..|:|:||||.:.|||...:: ...:|.|:.|.
Human   503 KYLEMMFTPTGVVMGARISEYLLEKSRVIKQAAREKNFHIFYYIYAGLHHQKKLSDFRLPEEKPP 567

  Fly   281 QY---------HYLAQGGCFTLPGRGDAKDFADIRAAMKVLSFKPEEVWSILSLLAAILHLGNLR 336
            :|         |.:.....:       .:.|..|:...:::.|..:||.|:..:||.||::||:.
Human   568 RYIADETGRVMHDITSKESY-------RRQFEAIQHCFRIIGFTDKEVHSVYRILAGILNIGNIE 625

  Fly   337 FTATEVANLATAEIDDTPN---LQRVAQLLGIPISALNAALTQRTIFVHGEHVTTSLSKEAAIEG 398
            |.|  :::....:..:.||   ||..|.:|.|....|..|||...:...||.:..:.:.:.|.:.
Human   626 FAA--ISSQHQTDKSEVPNAEALQNAASVLCISPEELQEALTSHCVVTRGETIIRANTVDRAADV 688

  Fly   399 RDAFVKSLYDGIFVRIVRRINETINKQVDQPMNS------IGVLDIFGFENFDNNSFEQLCINYA 457
            |||..|:||..:|..||.|||..:  |.|:.:.|      :|:|||||||||..|||||||||.|
Human   689 RDAMSKALYGRLFSWIVNRINTLL--QPDENICSAGGGMNVGILDIFGFENFQRNSFEQLCINIA 751

  Fly   458 NENLQQFFVGHIFKMEQDEYQNEHINWQHIEFQDNQQILDLIGMKPMNLMSLIDEESKFPKGTDQ 522
            ||.:|.:|..|:|.:||.|||||.|:...:|::||:.:||:...||:.|::|:||||:||:.|||
Human   752 NEQIQYYFNQHVFALEQMEYQNEGIDAVPVEYEDNRPLLDMFLQKPLGLLALLDEESRFPQATDQ 816

  Fly   523 TLLEKLHVQHGNRSIYVKGKTTQTSLFGIRHYAGVVMYNPLGFLEKNRDSFSGDLRTLVQRSTNK 587
            ||::|.  :...|..|..........|||:||||.|:|:..|.||||||:...|:..:::.|.||
Human   817 TLVDKF--EDNLRCKYFWRPKGVELCFGIQHYAGKVLYDASGVLEKNRDTLPADVVVVLRTSENK 879

  Fly   588 YLVDIF-------------------------PH----EMPMDTAK-----------KQPTLCVKF 612
            .|..:|                         ||    :..:||.:           |:.|:...|
Human   880 LLQQLFSIPLTKTGNLAQTRARITVASSSLPPHFSAGKAKVDTLEVIRHPEETTNMKRQTVASYF 944

  Fly   613 RNSLDMLMRTLSQAHPYFIRCIKPNEYKEPKNFDKELCVRQLRYSGMMETARIRRAGYPIRHAYR 677
            |.||..|:..:....|:|:||||||:.:|...|.:|..:.|||.:|::||..|||.||..|..:.
Human   945 RYSLMDLLSKMVVGQPHFVRCIKPNDDREALQFSRERVLAQLRSTGILETVSIRRQGYSHRILFE 1009

  Fly   678 AFVERYRLLV-----PPVGPLEQCDCRKLARQICEVALPADSDRQY---GKTKLFLRDEDDASLE 734
            .||:||..|.     .|:...|.|           ||:...|...:   ||||:||:     ...
Human  1010 EFVKRYYYLAFTAHQTPLASKESC-----------VAILEKSRLDHWVLGKTKVFLK-----YYH 1058

  Fly   735 LQRSQLMLKSIVTIQRGIRRVLFRRYMKRYREAIITVQRYWRGRLQRRKYQVMRQGFHRLGACIA 799
            :::..|:|:.::                   ..::.:|.|.:|.|..|:|:.:|:...: ||   
Human  1059 VEQLNLLLREVI-------------------GRVVVLQAYTKGWLGARRYKRVREKREK-GA--- 1100

  Fly   800 AQQLTTKFTMVRCRTIKLQALSRGYLVRKDFQKKLLERRKQ-----------NQLKKEELLKLAK 853
                           |.:|:..|||..|:.| ||:..||.:           ||.........|.
Human  1101 ---------------IAIQSAWRGYDARRKF-KKISNRRNESAAHNQAGDTSNQSSGPHSPVAAG 1149

  Fly   854 MKEAEELLRLQQLKE------------QKEREQREQQEKRLQEEQRLKAEAAARNALAMAAVQQK 906
            .:.:.|   :|...|            ::...|.|....|.|......| ...:|......:|.:
Human  1150 TRGSAE---VQDCSEPGDHKVLRGSVHRRSHSQAESNNGRTQTSSNSPA-VTEKNGSHSCDIQTR 1210

  Fly   907 RRTKPVKQE------------------------APKAPTLQA--RNSLPPPPTTLI---VAAPLP 942
            .|.:..:||                        :||...:.|  .|......|.|:   :..|.|
Human  1211 AREEHPRQEKQEWAIARGRICRAILGRHSQAQSSPKGCDIFAGHANKHSVSGTDLLSSRICHPAP 1275

  Fly   943 TRPASAVTRINTIPESPGTIDVESSKQMVDDVFRFLNDEPDAALRKLNNISSGDTIRLPKSVPNN 1007
            .:...::.   ..|:.||:.:..:.|...          |....::            ||.:.:.
Human  1276 DQQGLSLW---GAPQKPGSENGLAQKHRT----------PRRRCQQ------------PKMLSSP 1315

  Fly  1008 IDTSDFSYLKYAATYFGGGATAQHERKPLKKSLLK 1042
            .||..::.|.....|.|.      :|||.|...:|
Human  1316 EDTMYYNQLNGTLEYQGS------KRKPRKLGQIK 1344

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myo28B1NP_723294.1 MYSc_Myo7 81..726 CDD:276832 275/713 (39%)
IQ 765..785 CDD:197470 5/19 (26%)
Atrophin-1 <820..>946 CDD:460830 33/177 (19%)
MyTH4 1031..1239 CDD:470587 5/12 (42%)
FERM1_F1_Myosin-VII 1243..1334 CDD:340612
B41 1248..1429 CDD:214604
PH-like 1454..1547 CDD:473070
MyTH4 1674..1819 CDD:214535
FERM2_F1_Myosin-VII 1825..1919 CDD:340613
B41 1827..2032 CDD:214604
FERM_C2_MyoVII 2028..2121 CDD:270020
MYO3BXP_011508956.1 STKc_myosinIIIB_N 13..303 CDD:270808
MYSc_Myo3 366..1055 CDD:276830 275/713 (39%)
Blue background indicates that the domain is not in the aligned region.

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